iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098858

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_177749; POPTR_0001s03880g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s03880	POPTR_0001s03880.1	POPTR_0001s03880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-06	29.5	243	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++  + +pC+H fh  C+  w         + +CP+Cr
   Q: 243  CSVCLDDFeigSK-AREMPCKHKFHSGCILPW------LELHSSCPVCR 284
           ********66544.778***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEEAMAARYW CYMCSQMVNP VMEVEIKCPF CQSGFIEEMS SSTGDTQVPD SEFGSDRALS 60
LWAPILLGMM GNSRRRRRLR RMEYEEGEDD NDDGEANLGG ETEFEHEIES FIRRRRRSRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCTATTAA CCGCGCCGTA TTAAATGACT GAGATTGTCT GGTCCTCTCC TGGTCTGTGG 60
AGAATGGCAA TGACAAATTG GCAAATGACA ATCTAAGGTG GCTCTTCTCC TTCTCCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s03880g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006738	Arabidopsis thaliana	57.64	5.00e-93	333.00
IUUC-Bol-016413	Brassica oleracea	52.22	4.00e-84	305.00
IUUC-Ete-032501	Echinops telfairi	47.87	4.00e-19	86.30
IUUC-Gma-044146	Glycine max	64.08	5.00e-105	373.00
IUUC-Lpe-051411	Leersia perrieri	62.88	5.00e-45	174.00
IUUC-Mtr-058295	Medicago truncatula	62.08	3.00e-110	390.00
IUUC-Ont-071833	Oreochromis niloticus	39.86	2.00e-21	94.40
IUUC-Obr-076715	Oryza brachyantha	63.31	2.00e-47	182.00
IUUC-Opu-084151	Oryza punctata	39.04	2.00e-48	185.00
IUUC-Oru-084183	Oryza rufipogon	42.42	2.00e-47	182.00
IUUC-Ppe-101941	Prunus persica	68.47	2.00e-101	361.00
IUUC-Stu-112771	Solanum tuberosum	61.56	8.00e-95	339.00
IUUC-Tca-121112	Theobroma cacao	71.63	1.00e-98	352.00
IUUC-Tur-126272	Triticum urartu	64.66	7.00e-48	184.00
IUUC-Vvi-131512	Vitis vinifera	66.10	7.00e-91	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence