iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d042480	Zm00001d042480_T004	Zm00001d042480_T004
Zm00001d042480	Zm00001d042480_T007	Zm00001d042480_T007
Zm00001d042480	Zm00001d042480_T001	Zm00001d042480_T001
Zm00001d042480	Zm00001d042480_T005	Zm00001d042480_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.00e-31	109.9	350	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pee++CpIsl+lM dPv+++sG+ty+r +Iekw+++g++tcP+t+q+l++ +l+Pn+ +++li +wce+n+
   Q: 350  PPEELRCPISLQLMYDPVIISSGQTYERICIEKWFNDGHSTCPKTQQQLAHLSLTPNYCVKALIASWCEQND 421
           59********************************************************************97 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAHAKSIPEP ADIMFFFFFF ISGHKTSQML LTGCIGALVR CWSLGSSQRW KQWRPKKVLF 60
WLMMPRYHLY TEYLHAGICR AFHPSVSKLS AIFPFIEASR PRSKPGIQAL CSLHVALDKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCACG CTAAGTCCAT CCCTGAACCT GCCGACATCA TGTTTTTCTT CTTCTTTTTT 60
ATTTCTGGGC ACAAGACTAG TCAAATGCTG CTCACTGGGT GCATTGGCGC CTTAGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	83.86	0.00e+00	1257.00
IUUC-Atr-002816	Amborella trichopoda	52.03	0.00e+00	668.00
IUUC-Aly-005662	Arabidopsis lyrata	54.98	0.00e+00	766.00
IUUC-Ath-006967	Arabidopsis thaliana	55.49	0.00e+00	762.00
IUUC-Bdi-014509	Brachypodium distachyon	85.61	0.00e+00	1230.00
IUUC-Bol-015443	Brassica oleracea	55.29	0.00e+00	783.00
IUUC-Bra-017668	Brassica rapa	55.54	0.00e+00	788.00
IUUC-Hvu-047761	Hordeum vulgare	83.67	0.00e+00	1231.00
IUUC-Lpe-051154	Leersia perrieri	85.19	0.00e+00	1250.00
IUUC-Mtr-058026	Medicago truncatula	55.23	0.00e+00	752.00
IUUC-Oba-075037	Oryza barthii	86.32	0.00e+00	1325.00
IUUC-Obr-076068	Oryza brachyantha	86.32	0.00e+00	1281.00
IUUC-Ogl-077029	Oryza glaberrima	86.32	0.00e+00	1325.00
IUUC-Ogu-078230	Oryza glumaepatula	86.28	0.00e+00	1322.00
IUUC-Oin-079566	Oryza indica	86.46	0.00e+00	1323.00
IUUC-Olo-080879	Oryza longistaminata	86.25	0.00e+00	1222.00
IUUC-Ome-081577	Oryza meridionalis	86.21	0.00e+00	1318.00
IUUC-Oni-082610	Oryza nivara	86.30	0.00e+00	1319.00
IUUC-Opu-083186	Oryza punctata	85.68	0.00e+00	1313.00
IUUC-Oru-084375	Oryza rufipogon	85.71	0.00e+00	1288.00
IUUC-Osa-085376	Oryza sativa	84.97	0.00e+00	1287.00
IUUC-Ppa-095879	Physcomitrella patens	37.69	1.00e-117	417.00
IUUC-Pop-100088	Populus trichocarpa	55.40	0.00e+00	835.00
IUUC-Sit-109865	Setaria italica	92.46	0.00e+00	1403.00
IUUC-Sly-110840	Solanum lycopersicum	53.74	0.00e+00	744.00
IUUC-Stu-112347	Solanum tuberosum	53.36	0.00e+00	739.00
IUUC-Sbi-114310	Sorghum bicolor	94.66	0.00e+00	1405.00
IUUC-Tca-121734	Theobroma cacao	56.52	0.00e+00	836.00
IUUC-Tae-125766	Triticum aestivum	84.16	0.00e+00	1272.00
IUUC-Tur-126692	Triticum urartu	78.93	0.00e+00	1071.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence