• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Details
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-006766
UUCD1 version UUC-ArT-00868
Ensembl Protein ID AT5G05280.1
UniProt Accession Q9FLC6; ATL73_ARATH
Genbank Protein ID BAB09971.1; AED90850.1; AT5G05280.1
Protein Name RING-H2 finger protein ATL73; RING-type E3 ubiquitin transferase ATL73
Genbank Nucleotide ID AB010692; CP002688; BX830198
Gene Name ATL73; At5g05280; K18I23.8
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G05280 AT5G05280.1 AT5G05280.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 23347376
Classification
Family E-value Score Start End
E3 activity/RING/RING 3.50e-08 34.7 113 155
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    C+iCl df ++ ++vlp C+H fh +C+ w + +CP+Cr
   Q: 113 CLICLGDFvegET-VRVLPkCNHGFHVKCIDTW------LLSHSSCPTCR 155
    ********77444.*******************......888999****8 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MARFLLATQA TPTISATDAN PRTLGDSVSN NKNIASMDTH MVIILAALLC ALICALGINS 60
VLRCVLRCTR RFTPNEDPVD TNANVAKGIK KRALKVIPVD SYSPELKMKA TECLICLGDF 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006766|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTATTACTAG CCTATTTCCT ACTCTTATAG TACAACTTAT TTCCTTATGT GTAAAACCCA 60
AAGAAGAACT TGTATAAAGA AACAGATCAT AAAGGATTTG AGCTTTGATT TTTCTCCATG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006766|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009901--P:anther dehiscence
GO:0009555--P:pollen development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0080141--P:regulation of jasmonic acid biosynthetic process
GO:0048443--P:stamen development

KEGG ath:AT5G05280
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005951 Arabidopsis lyrata 95.51 1.00e-87 314.00
IUUC-Bol-015607 Brassica oleracea 78.29 2.00e-65 241.00
IUUC-Mtr-058744 Medicago truncatula 54.49 4.00e-35 140.00
IUUC-Ppa-095980 Physcomitrella patens 44.44 1.00e-24 105.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved