iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078196

Ensembl Protein ID

OGLUM06G01890.1

UniProt Accession

A0A0E0A4I3; A0A0E0A4I3_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM06G01890	OGLUM06G01890.1	OGLUM06G01890.1
OGLUM06G01890	OGLUM06G01890.2	OGLUM06G01890.2
OGLUM06G01890	OGLUM06G01890.3	OGLUM06G01890.3
OGLUM06G01890	OGLUM06G01890.4	OGLUM06G01890.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-21	75.2	25	62

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH + v++++f ++ +l+ sG+ Dg ++vWD+ +++ +
   Q: 25   GHRAAVNDVCFhPSlPLIFSGAADGELRVWDTASHRTV 62
           8***********999****************9888765 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MALAEAENPP RRRRPAPDPV AVLRGHRAAV NDVCFHPSLP LIFSGAADGE LRVWDTASHR 60
TVSSVWAHGG SAGVYSVAAS TRLGNKIISQ GRDGSCKCWE IEEAGLSRRA LYTIRTSTYH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGCCCAGC CCTCCGGCCC ACTCGGCTCT CTAGTAGGCC TCAAACCATT CTCATCTGGT 60
CACTGTCTAC TTCGACCTCA CGCCGAAGCT TCCAGAAAGT TCTAATCTCG CAGCCCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0048700--P:acquisition of desiccation tolerance in seed
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0009555--P:pollen development
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	56.53	1.00e-123	436.00
IUUC-Aml-001556	Ailuropoda melanoleuca	43.06	2.00e-27	115.00
IUUC-Atr-002691	Amborella trichopoda	47.55	4.00e-105	374.00
IUUC-Apl-003227	Anas platyrhynchos	38.78	5.00e-24	104.00
IUUC-Aly-006168	Arabidopsis lyrata	50.61	4.00e-107	380.00
IUUC-Ath-007145	Arabidopsis thaliana	48.66	1.00e-102	365.00
IUUC-Acl-008132	Aspergillus clavatus	35.65	2.00e-10	60.10
IUUC-Ang-009760	Aspergillus niger	36.00	2.00e-09	56.20
IUUC-Bgr-012119	Blumeria graminis	34.81	3.00e-13	68.90
IUUC-Bta-012556	Bos taurus	34.04	7.00e-27	113.00
IUUC-Bdi-014151	Brachypodium distachyon	63.01	3.00e-140	491.00
IUUC-Bol-016319	Brassica oleracea	49.50	6.00e-107	380.00
IUUC-Bra-016675	Brassica rapa	50.25	9.00e-108	382.00
IUUC-Cja-019523	Callithrix jacchus	42.53	6.00e-28	117.00
IUUC-Cfa-021217	Canis familiaris	43.14	2.00e-29	122.00
IUUC-Cpo-021506	Cavia porcellus	41.26	9.00e-25	106.00
IUUC-Csa-023674	Chlorocebus sabaeus	45.14	6.00e-28	117.00
IUUC-Dre-027592	Danio rerio	38.10	2.00e-24	105.00
IUUC-Dno-029880	Dasypus novemcinctus	43.06	5.00e-27	114.00
IUUC-Dor-030266	Dipodomys ordii	39.31	3.00e-25	108.00
IUUC-Dse-031212	Dothistroma septosporum	34.31	2.00e-12	66.60
IUUC-Dme-032209	Drosophila melanogaster	32.07	2.00e-20	92.80
IUUC-Eca-033371	Equus caballus	43.75	2.00e-28	119.00
IUUC-Fca-035558	Felis catus	43.06	1.00e-27	115.00
IUUC-Fal-036794	Ficedula albicollis	38.42	1.00e-25	109.00
IUUC-Gmo-038742	Gadus morhua	36.73	7.00e-20	90.50
IUUC-Gga-040868	Gallus gallus	38.78	1.00e-24	106.00
IUUC-Gac-041646	Gasterosteus aculeatus	38.10	5.00e-24	104.00
IUUC-Gma-044269	Glycine max	49.39	4.00e-106	377.00
IUUC-Ggo-044553	Gorilla gorilla	42.53	8.00e-29	120.00
IUUC-Hsa-046217	Homo sapiens	42.53	7.00e-29	120.00
IUUC-Hvu-047647	Hordeum vulgare	62.65	2.00e-143	501.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	41.96	5.00e-26	111.00
IUUC-Lch-050134	Latimeria chalumnae	30.84	7.00e-23	100.00
IUUC-Lpe-051524	Leersia perrieri	70.77	7.00e-160	555.00
IUUC-Loc-051757	Lepisosteus oculatus	36.05	7.00e-21	94.40
IUUC-Laf-053733	Loxodonta africana	39.08	6.00e-26	110.00
IUUC-Mcc-055477	Macaca mulatta	44.64	4.00e-20	91.30
IUUC-Meu-056758	Macropus eugenii	47.06	3.00e-13	68.20
IUUC-Mor-057289	Magnaporthe oryzae	33.63	5.00e-10	58.50
IUUC-Mpo-057309	Magnaporthe poae	52.00	6.00e-09	54.70
IUUC-Mtr-058616	Medicago truncatula	49.88	7.00e-102	363.00
IUUC-Mvi-060385	Microbotryum violaceum	26.49	1.00e-09	57.00
IUUC-Mmr-061675	Microcebus murinus	39.04	1.00e-22	99.80
IUUC-Mdo-062782	Monodelphis domestica	40.82	3.00e-27	115.00
IUUC-Mmu-064058	Mus musculus	40.23	2.00e-27	115.00
IUUC-Mac-065262	Musa acuminata	51.71	2.00e-118	418.00
IUUC-Mpu-066633	Mustela putorius furo	41.89	8.00e-24	104.00
IUUC-Mlu-067333	Myotis lucifugus	42.36	2.00e-27	115.00
IUUC-Nfi-068581	Neosartorya fischeri	31.37	5.00e-10	58.50
IUUC-Ncr-068680	Neurospora crassa	44.83	6.00e-08	51.60
IUUC-Nle-069485	Nomascus leucogenys	45.14	3.00e-28	118.00
IUUC-Oan-073361	Ornithorhynchus anatinus	37.76	2.00e-22	99.00
IUUC-Ocu-073923	Oryctolagus cuniculus	40.97	9.00e-20	90.90
IUUC-Oba-075743	Oryza barthii	100.00	0.00e+00	853.00
IUUC-Obr-076879	Oryza brachyantha	74.40	2.00e-164	570.00
IUUC-Ogl-077813	Oryza glaberrima	82.85	0.00e+00	679.00
IUUC-Oin-080131	Oryza indica	83.09	0.00e+00	682.00
IUUC-Olo-080613	Oryza longistaminata	65.00	8.00e-110	389.00
IUUC-Ome-081912	Oryza meridionalis	89.86	0.00e+00	750.00
IUUC-Oni-082813	Oryza nivara	75.94	4.00e-180	623.00
IUUC-Opu-083663	Oryza punctata	81.28	0.00e+00	683.00
IUUC-Oru-085102	Oryza rufipogon	89.86	0.00e+00	747.00
IUUC-Osa-086204	Oryza sativa	83.09	0.00e+00	682.00
IUUC-Ola-086541	Oryzias latipes	41.50	7.00e-25	107.00
IUUC-Olu-087776	Ostreococcus lucimarinus	34.34	9.00e-17	79.00
IUUC-Oga-088039	Otolemur garnettii	40.00	1.00e-27	116.00
IUUC-Oar-089704	Ovis aries	49.40	1.00e-19	87.00
IUUC-Ptr-091291	Pan troglodytes	42.53	8.00e-29	120.00
IUUC-Pan-092644	Papio anubis	45.14	4.00e-28	117.00
IUUC-Psi-093646	Pelodiscus sinensis	40.82	4.00e-25	107.00
IUUC-Ppa-095698	Physcomitrella patens	36.61	1.00e-68	252.00
IUUC-Pfo-096601	Poecilia formosa	37.41	7.00e-22	97.40
IUUC-Pab-098407	Pongo abelii	44.44	1.00e-27	115.00
IUUC-Pop-099193	Populus trichocarpa	49.28	1.00e-107	382.00
IUUC-Pca-100366	Procavia capensis	39.86	1.00e-21	96.30
IUUC-Ppe-101608	Prunus persica	48.03	9.00e-107	379.00
IUUC-Pva-102775	Pteropus vampyrus	39.73	2.00e-26	112.00
IUUC-Rno-105626	Rattus norvegicus	39.08	1.00e-26	113.00
IUUC-Sha-106539	Sarcophilus harrisii	41.50	8.00e-27	113.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	31.50	4.00e-16	78.20
IUUC-Spo-108326	Schizosaccharomyces pombe	38.51	4.00e-16	78.60
IUUC-Smo-108756	Selaginella moellendorffii	40.69	6.00e-81	293.00
IUUC-Sit-109771	Setaria italica	65.85	1.00e-148	518.00
IUUC-Sly-111138	Solanum lycopersicum	50.00	3.00e-111	394.00
IUUC-Stu-112425	Solanum tuberosum	50.49	1.00e-110	392.00
IUUC-Sbi-114356	Sorghum bicolor	65.64	4.00e-144	503.00
IUUC-Ssc-115256	Sus scrofa	43.06	7.00e-29	120.00
IUUC-Tgu-116774	Taeniopygia guttata	39.46	6.00e-25	107.00
IUUC-Tru-117900	Takifugu rubripes	27.91	3.00e-27	115.00
IUUC-Tsy-119540	Tarsius syrichta	50.65	1.00e-17	83.20
IUUC-Tni-120252	Tetraodon nigroviridis	38.78	2.00e-24	105.00
IUUC-Tca-121717	Theobroma cacao	49.64	2.00e-111	394.00
IUUC-Tae-123804	Triticum aestivum	63.37	8.00e-149	519.00
IUUC-Tme-127222	Tuber melanosporum	32.08	3.00e-10	58.90
IUUC-Ttr-129240	Tursiops truncatus	43.75	2.00e-26	112.00
IUUC-Uma-129437	Ustilago maydis	33.61	3.00e-09	55.50
IUUC-Vvi-131718	Vitis vinifera	49.51	6.00e-108	383.00
IUUC-Xtr-132109	Xenopus tropicalis	31.88	1.00e-24	106.00
IUUC-Xma-133366	Xiphophorus maculatus	38.10	3.00e-22	98.60
IUUC-Zma-135563	Zea mays	57.34	2.00e-126	445.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence