iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108913

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB43

Genbank Nucleotide ID

GL377592

Gene Name

PUB43-1; SELMODRAFT_103330

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_103330	EFJ23535	EFJ23535

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.00e-20	71.2	29	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++e+flCp+++ +M+dPv++  +G ty+r++Ie ++a+++       cP t+++l++ dl+ ++++r+ i++w+++n+s
   Q: 29   PYEAFLCPLTGRVMSDPVTIVeTGKTYERKAIEAFFANCQDnkkpaICPQTSKKLQSLDLKASIAIRNAIEEWHARNES 107
           689***************9888**************6666666788*****************************9986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MFDNVVKRHH GRSSGNYHES RQRRRYEDPY EAFLCPLTGR VMSDPVTIVE TGKTYERKAI 60
EAFFANCQDN KKPAICPQTS KKLQSLDLKA SIAIRNAIEE WHARNESTRI ENAVPMLDAG 120

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Nucleotide Sequence
(Fasta)

ATGTTTGATA ACGTTGTCAA GAGACATCAT GGACGCAGCA GCGGTAACTA CCACGAGTCT 60
CGGCAGCGGC GACGTTACGA GGATCCTTAC GAGGCGTTTC TCTGCCCGTT GACTGGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_103330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025127	Ciona intestinalis	35.82	1.00e-07	49.30
IUUC-Ggo-045206	Gorilla gorilla	36.00	2.00e-06	45.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence