iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058529

Ensembl Protein ID

KEH34313

UniProt Accession

A0A072UYY7; A0A072UYY7_MEDTR

Genbank Protein ID

KEH34313.1

Protein Name

PHD zinc finger protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g464550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g464550	KEH34313	KEH34313

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.70e-09	37.2	710	751

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C vC+ gge    l+ C++C + +H++Cl+l+   +lp+ e w+Cp+Cr
   Q: 710  ICSVCHFGGE----LLLCDHCPSSYHKTCLGLE---DLPDGE-WFCPSCR 751
           7*********....*******************...*****8.******7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEGFETSSNS QSKLKINERV EVKSFEEGFL GSWHPGTVID SEKLKRHVQY ENILNDNGLG 60
NFVEIVSVSS VLDGDIGSLS KRGRIRPVPP LVEFEKCDLK YGLCVDVNYQ EAWWEGVVND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTACTTGGG AGCAAAGTTT AAAAAAAATA CCCAGAAGAG AAGAAAGAGA CCTTATCAAA 60
TCAAAAACAA CAAAAATTTT ACCTTATTTT TCTCTTTTTT GTTTCTCTCG TATAAAACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR008395--Agenet-like_dom
IPR014002--Agenet_dom_plant
IPR000182--GNAT_dom
IPR032308--Jas
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51186--GNAT
PS50016--ZF_PHD_2

Pfam

PF05641--Agenet
PF16135--Jas
PF00628--PHD

SMART

SM00743--Agenet
SM00249--PHD

Gene Ontology

GO:0008080--F:N-acetyltransferase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g464550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006442	Arabidopsis lyrata	37.48	0.00e+00	668.00
IUUC-Gma-044238	Glycine max	55.09	0.00e+00	1134.00
IUUC-Ome-081749	Oryza meridionalis	30.57	5.00e-87	315.00
IUUC-Pop-099041	Populus trichocarpa	43.34	3.00e-138	485.00
IUUC-Spo-108017	Schizosaccharomyces pombe	37.68	7.00e-09	55.10
IUUC-Sly-111087	Solanum lycopersicum	37.83	1.00e-166	579.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence