iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-044036

Ensembl Protein ID

GLYMA08G22910.4

UniProt Accession

I1KVH4; I1KVH4_SOYBN

Genbank Protein ID

KRH44495.1; KRH44496.1; KRH44497.1; KRH44498.1; KRH44499.1; KRH44500.1; KRH44501.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841; CM000841; CM000841; CM000841; CM000841; CM000841; CM000841

Gene Name

LOC100795759; GLYMA_08G214600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G22910	GLYMA08G22910.4	GLYMA08G22910.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-21	77.3	461	494
UBD/Beta-Prp	2.00e-44	153.6	420	758

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlr 31
           H ++v++laf  ++  l +++++dD+tikvWD  
   Q: 461  HVGGVNDLAFshPNkQLcVITCGDDKTIKVWDAA 494
           999*******99764334699***********65 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           ++ v +spd+ l+ +++ ++ +++++++ g+ +r+      h ++v+++ fs+  k    +t+++D+tikvwd  +g   +t++ghe+ v+s+ 
   Q: 420  VNRVIWSPDGALFGVAYSRHIVQIYSYHGGDEIRQHleiDAHVGGVNDLAFSHPNKqlCVITCGDDKTIKVWDAASGAKQYTFEGHEAPVYSVC 513
           566889**************************765323389***********99888999********************************85 PP
   S: 102  fsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl..Dr..tvrlWdlktgkllrtltgghtdsvyslsfd 189
            +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg  l+s+++  D+   +  W+ + g + rt +g  ++s   ++fd
   Q: 514  PHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYEAP-GRWCTTMAYSADGTRLFSCGTskDGesSIVEWNESEGAVKRTYQGFRKRSLGVVQFD 606
           5544388***************99997777745555.5599999999999888888652254335777************************** PP
   S: 190  sngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn................ 264
            ++++++++++d ++k+wd+ + + + t+ +    + s  +rf +++++l++ + ++ i+i  + +   ll+tl+++                 
   Q: 607  TTKNRFLAAGDDFSIKFWDMDNVQLLTTVDADGGLPASprIRFNKDGTLLAVSANENGIKILaNGDGIRLLRTLENSLyeasrasealtkptin 700
           *****************************999987775338888*****************655555555555555557777778888888888 PP
   S: 265  ..................ssvisvavlsfgdnvl......vlgsedskvniwklkkne 298
                             ssv+++a+++ + ++l      ++ ++++k +iwkl++++
   Q: 701  pisaaaaaatsaalaeraSSVVAIAGMNGDTRNLgdvkprISEESNDKSKIWKLTEIN 758
           8888888888888888888888888866666666888888888889999999999876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFATFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTATCACCT CCACTATCTG TCGCCTCCTA TATAAAAAAC ACCCTATTTC TGCAAGTTCA 60
AATGACCTCT TTCTCTCTCT CTATATATTT TCGAGTTTCT AGAGAGCGAG CGAGTAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

gmx:100795759

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058037	Medicago truncatula	93.53	0.00e+00	2058.00
IUUC-Ppa-095814	Physcomitrella patens	70.69	0.00e+00	1582.00
IUUC-Pop-098876	Populus trichocarpa	85.82	0.00e+00	1979.00
IUUC-Smo-109617	Selaginella moellendorffii	69.60	0.00e+00	1536.00
IUUC-Tca-121628	Theobroma cacao	88.29	0.00e+00	1999.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence