iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058244

Ensembl Protein ID

AES87708

UniProt Accession

G7JN71; G7JN71_MEDTR

Genbank Protein ID

AES87708.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g032460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g032460	AES87708	AES87708

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	9.80e-26	91.1	101	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltc t  d ik ktpeeiRk Fni+nD+tpeEe++vR+En WA
   Q: 101  KSLLDLTCMTTMDNIKDKTPEEIRKIFNIKNDYTPEEEEEVRRENSWA 148
           89*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGSSPKIILK SSDGETFKIE KAVAMQSQTI KHLIDEECAN DTGIPLTNVT GKILAMVIEY 60
CKKHVDAASS DELEKWDAEF VKVDQNTLFN LIMAANYLNI KSLLDLTCMT TMDNIKDKTP 120

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Nucleotide Sequence
(Fasta)

ATGGGATCAT CACCGAAGAT CATCTTGAAG AGTTCTGATG GCGAGACCTT TAAAATCGAA 60
AAGGCGGTGG CAATGCAATC CCAGACGATC AAGCATTTGA TCGACGAGGA GTGTGCCAAC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_4g032460

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence