iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1905__AT5G59550.1	fgenesh2_kg.8__1905__AT5G59550.1	fgenesh2_kg.8__1905__AT5G59550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-07	32.4	199	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C e f    d  + +pC+H+fh dC+  w       s + +CP+Cr
   Q: 199  CAVCTEIFeaeTD-AREMPCKHLFHDDCIVPW------LSIRNSCPVCR 240
           ******9966333.899***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPSTPTTTST TTPITASYWC YSCTRFVSVW ADQGTATVGG VACPHCDGGF IEEINDSSSA 60
ATELAIPAST EVRSINNNRR SVIRRRRSGR RPSFNPVIVL QGGAGEREDG EEGDAARDRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGTCAA CGCCGACGAC GACGTCTACA ACAACGCCGA TCACGGCTTC GTATTGGTGT 60
TATAGCTGTA CGCGTTTCGT CAGCGTTTGG GCTGATCAAG GCACAGCCAC CGTCGGCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
GO:0009737--P:response to abscisic acid
GO:0010200--P:response to chitin
GO:0009414--P:response to water deprivation

KEGG

aly:ARALYDRAFT_496089

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007235	Arabidopsis thaliana	96.46	6.00e-148	516.00
IUUC-Bdi-014752	Brachypodium distachyon	47.15	1.00e-63	236.00
IUUC-Bol-016549	Brassica oleracea	77.01	9.00e-127	446.00
IUUC-Bra-017069	Brassica rapa	75.07	1.00e-125	442.00
IUUC-Gma-043139	Glycine max	52.11	7.00e-70	256.00
IUUC-Hvu-047236	Hordeum vulgare	52.80	3.00e-48	184.00
IUUC-Lpe-051386	Leersia perrieri	51.34	5.00e-70	257.00
IUUC-Mtr-057991	Medicago truncatula	52.90	2.00e-71	262.00
IUUC-Mac-065350	Musa acuminata	52.38	1.00e-68	252.00
IUUC-Oba-075196	Oryza barthii	40.18	4.00e-44	170.00
IUUC-Obr-076880	Oryza brachyantha	47.60	2.00e-42	164.00
IUUC-Ogl-077103	Oryza glaberrima	46.87	2.00e-66	244.00
IUUC-Ogu-078379	Oryza glumaepatula	42.02	1.00e-49	189.00
IUUC-Oin-080146	Oryza indica	42.64	1.00e-49	188.00
IUUC-Ome-081205	Oryza meridionalis	47.16	2.00e-68	252.00
IUUC-Oni-082393	Oryza nivara	47.76	9.00e-67	246.00
IUUC-Opu-084123	Oryza punctata	42.02	8.00e-50	189.00
IUUC-Oru-084888	Oryza rufipogon	47.76	9.00e-67	246.00
IUUC-Osa-085474	Oryza sativa	57.47	5.00e-60	223.00
IUUC-Ptt-103768	Puccinia triticina	44.00	2.00e-15	76.60
IUUC-Sha-106637	Sarcophilus harrisii	52.70	9.00e-21	92.80
IUUC-Sit-109708	Setaria italica	43.05	6.00e-47	180.00
IUUC-Sly-110949	Solanum lycopersicum	51.53	9.00e-74	270.00
IUUC-Sbi-114707	Sorghum bicolor	53.07	7.00e-48	184.00
IUUC-Tca-121520	Theobroma cacao	53.67	3.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence