iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121262

Ensembl Protein ID

EOX92853

UniProt Accession

A0A061DSA8; A0A061DSA8_THECC

Genbank Protein ID

EOX92853.1

Protein Name

RNI-like superfamily protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001714

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001714	EOX92853	EOX92853

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	62.61	0.00e+00	847.00	IUUC-Ath-007057

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAAIHDIPDV ILSNIFASIS DTRSRNSLSL VSRKFMLLER ATRFSLTLRG NAKDLFMIPT 60
CFRSVTRLDL SLLSPWGHSL LSSSHLPDPQ LLAHRLRVAF PAVRSLTVYA RSPSTIQMLV 120

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Nucleotide Sequence
(Fasta)

CTGTATTAAA GGCCGCGTAA TCTTTCAAGA CAAAAAGAAA AAGAAAAGGG GAAATGAATG 60
GAGGAGAAGG GAAGGGGGGT GGGTAAATCT TTTGTAGTGG GATCCACACG CACGTGGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0009926--P:auxin polar transport
GO:0042335--P:cuticle development
GO:0010187--P:negative regulation of seed germination
GO:1902584--P:positive regulation of response to water deprivation
GO:0009934--P:regulation of meristem structural organization
GO:0009416--P:response to light stimulus
GO:0009414--P:response to water deprivation
GO:0010016--P:shoot system morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006349	Arabidopsis lyrata	61.79	0.00e+00	815.00
IUUC-Ath-007057	Arabidopsis thaliana	62.61	0.00e+00	863.00
IUUC-Bol-016586	Brassica oleracea	61.03	0.00e+00	862.00
IUUC-Bra-017251	Brassica rapa	62.20	0.00e+00	853.00
IUUC-Gma-043976	Glycine max	61.56	0.00e+00	847.00
IUUC-Mtr-058145	Medicago truncatula	61.17	0.00e+00	854.00
IUUC-Mac-064499	Musa acuminata	74.37	1.00e-88	318.00
IUUC-Pop-099037	Populus trichocarpa	64.66	0.00e+00	915.00
IUUC-Ppe-101483	Prunus persica	66.26	0.00e+00	924.00
IUUC-Sly-111608	Solanum lycopersicum	63.51	0.00e+00	897.00
IUUC-Stu-112390	Solanum tuberosum	63.60	0.00e+00	885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence