iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121293

Ensembl Protein ID

EOY28504

UniProt Accession

A0A061GN12; A0A061GN12_THECC

Genbank Protein ID

EOY28504.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001884

Gene Name

TCM_030046

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_030046	EOY28504	EOY28504

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-30	104.5	5	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawc 69
           +p++f+CpIsle+M+dPv+l+sG+t+dr+sI++wl+sg++tcP+t+ pl e+ + +Pn++lr+li+++ 
   Q: 5    LPDDFKCPISLEIMSDPVILASGHTFDRTSIQRWLDSGHRTCPITKLPLPEHPFlIPNHALRSLISNYT 73
           79***********************************************777766***********986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MATQLPDDFK CPISLEIMSD PVILASGHTF DRTSIQRWLD SGHRTCPITK LPLPEHPFLI 60
PNHALRSLIS NYTLVTPSNS QPCPQPQTLC SALTSPSSSV ETKLESLTHL AKLTKRDSAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAGTATCG AAGGACCTGT CCGAAAATTT CGGTGAATCA TCAGGGCATT GTAGGCACTT 60
GGTCACTCAC AAACTTACCT TCACAAGCTA AGTGCTCCCT CTCGCAACTG AAAAGGTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

tcc:TCM_030046

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	54.25	4.00e-80	290.00
IUUC-Aly-006175	Arabidopsis lyrata	67.48	5.00e-130	456.00
IUUC-Ath-006926	Arabidopsis thaliana	66.94	8.00e-128	449.00
IUUC-Bol-015331	Brassica oleracea	64.11	4.00e-111	393.00
IUUC-Bra-017717	Brassica rapa	63.96	3.00e-101	360.00
IUUC-Gma-043375	Glycine max	67.31	2.00e-109	387.00
IUUC-Mtr-058590	Medicago truncatula	65.95	8.00e-122	429.00
IUUC-Pop-099846	Populus trichocarpa	68.80	2.00e-132	464.00
IUUC-Ppe-101638	Prunus persica	71.00	3.00e-141	493.00
IUUC-Sit-110168	Setaria italica	44.92	2.00e-46	178.00
IUUC-Sly-111598	Solanum lycopersicum	64.84	3.00e-114	404.00
IUUC-Stu-112509	Solanum tuberosum	64.56	2.00e-110	391.00
IUUC-Tae-124445	Triticum aestivum	44.63	4.00e-55	207.00
IUUC-Vvi-131324	Vitis vinifera	76.03	3.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence