iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000046495.1	ENSMMUT00000066942.1	ENSMMUP00000043849.1
ENSMMUG00000046495.1	ENSMMUT00000060143.1	ENSMMUP00000050188.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-51	169.1	465	503
UBD/Beta-Prp	6.20e-64	217.1	335	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++v+++af +d ++l+sGs D+ +++W++ +g l++s
   Q: 465  HQEPVYSVAFsPDgKYLASGSFDKCVHIWNTQSGSLVHS 503
           9**********999******************9999875 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
             +v++ ++++ +a+ s+d +i v ++     +++++gh++ev+a+k++p+g +l+++s+D+t+k+w++++  cvh l++h +++++++
   Q: 335  ALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIK 422
           444555.6666677777777777777777777777777777777777777777777777777777777777777777777777777777 PP
   S: 102  fsp.........sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
           +sp         s+  l+s+s d+t+r+wd+e+g c + tl++h++ v +v+++pdg++l+sGs D++v +W+ ++g+l++  +g  t+
   Q: 423  WSPtgpatsnpnSSIMLASASFDSTVRLWDMEQGVCTH-TLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG--TG 508
           76655555444223467777777777777777777777.7777777777777777777777777777777777777777777776..77 PP
   S: 182  svyslsfdsngkelvsgsldgtv 204
            +  + ++ +g  + + + dg+v
   Q: 509  GIFEVCWNAQGDKVGASASDGSV 531
           77777777777777777777766 PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

YQQCKKCGFC FINTSLLRGE ATMSITSDEV NFLVYRYLQE SGFSHSAFTF GIESHISQSN 60
INGTLVPPAA LISILQKGLQ YVEAEISINK DGTVFDSSPI ESLSLIDAVI PDVVQMRQQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACCAACAGT GTAAAAGTGT TCCTATTTCT CCAGATCCTT TCGAGCATCT GTTTCCTGAC 60
TCGCTCTGTC ACCCAGGCTG GAGTGCAGTG GCCAGATCTC AGCTCACTGC AAGCTCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007869	Ashbya gossypii	24.90	4.00e-38	152.00
IUUC-Cne-026946	Cryptococcus neoformans	38.01	4.00e-31	129.00
IUUC-Hsa-046373	Homo sapiens	92.84	0.00e+00	969.00
IUUC-Mtr-058624	Medicago truncatula	46.77	3.00e-143	501.00
IUUC-Mac-065508	Musa acuminata	45.40	5.00e-107	381.00
IUUC-Olu-087589	Ostreococcus lucimarinus	53.30	2.00e-156	545.00
IUUC-Ptr-090793	Pan troglodytes	91.67	0.00e+00	944.00
IUUC-Ppe-101572	Prunus persica	50.09	6.00e-144	504.00
IUUC-Stu-112786	Solanum tuberosum	49.61	2.00e-143	502.00
IUUC-Uma-129469	Ustilago maydis	43.92	2.00e-59	224.00
IUUC-Yli-134648	Yarrowia lipolytica	29.97	5.00e-42	165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence