iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121841

Ensembl Protein ID

EOY17529

UniProt Accession

A0A061FSL6; A0A061FSL6_THECC

Genbank Protein ID

EOY17529.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_042342

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042342	EOY17529	EOY17529

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-31	105.5	272	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v+claf   +++ +++Gs D+t+k++Dlr+
   Q: 272  HQSEVNCLAFnpfNEWVVATGSTDKTVKLFDLRK 305
           9**********977799**************985 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGKDEEEMRG EIEERLINEE YKIWKKNTPF LYDLVITHAL EWPSLTVEWL PDRDEPPGKD 60
YSVQKMILGT HTSENEPNYL MLAQVQLPLQ DSENDARHYD HDRSDLGGFG CASGKVQIIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAGGAGGT ATCCATCAGG TACGGTATAA AATAAAAAGT ATAATTATTA GGACTGGTTT 60
GAAAACCTGC TAGGCTAGGG TTTCAGGAAT TCTGTCTCGT AAGTTGGCTC CCAAATCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

tcc:TCM_042342

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	78.92	0.00e+00	667.00
IUUC-Aml-001339	Ailuropoda melanoleuca	67.50	1.00e-161	561.00
IUUC-Atr-003075	Amborella trichopoda	87.97	0.00e+00	777.00
IUUC-Apl-003952	Anas platyrhynchos	68.25	8.00e-166	575.00
IUUC-Aca-004508	Anolis carolinensis	68.25	8.00e-166	575.00
IUUC-Aly-006342	Arabidopsis lyrata	91.55	0.00e+00	798.00
IUUC-Ath-006855	Arabidopsis thaliana	91.98	0.00e+00	803.00
IUUC-Ago-007892	Ashbya gossypii	35.73	9.00e-69	253.00
IUUC-Acl-008163	Aspergillus clavatus	48.77	3.00e-115	407.00
IUUC-Afl-008645	Aspergillus flavus	48.79	6.00e-115	406.00
IUUC-Afu-009091	Aspergillus fumigatus	48.53	3.00e-113	401.00
IUUC-Ani-009478	Aspergillus nidulans	44.96	1.00e-95	342.00
IUUC-Ang-009707	Aspergillus niger	48.28	4.00e-111	394.00
IUUC-Aor-010028	Aspergillus oryzae	48.79	6.00e-115	406.00
IUUC-Ate-010416	Aspergillus terreus	48.77	1.00e-115	409.00
IUUC-Ame-010598	Astyanax mexicanus	67.75	3.00e-164	570.00
IUUC-Bgr-012001	Blumeria graminis	44.50	2.00e-95	342.00
IUUC-Bta-012851	Bos taurus	68.25	6.00e-166	575.00
IUUC-Bci-013815	Botrytis cinerea	47.22	2.00e-114	404.00
IUUC-Bdi-014926	Brachypodium distachyon	87.80	0.00e+00	766.00
IUUC-Bol-015856	Brassica oleracea	89.49	0.00e+00	787.00
IUUC-Bra-016725	Brassica rapa	81.46	0.00e+00	736.00
IUUC-Cel-018587	Caenorhabditis elegans	59.85	1.00e-142	498.00
IUUC-Cja-019884	Callithrix jacchus	68.25	6.00e-166	575.00
IUUC-Cfa-020343	Canis familiaris	68.25	6.00e-166	575.00
IUUC-Cpo-021591	Cavia porcellus	68.25	6.00e-166	575.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	68.75	2.00e-172	597.00
IUUC-Csa-023738	Chlorocebus sabaeus	66.75	7.00e-162	562.00
IUUC-Cho-024506	Choloepus hoffmanni	68.00	2.00e-164	570.00
IUUC-Cin-025589	Ciona intestinalis	64.24	4.00e-163	566.00
IUUC-Csv-026216	Ciona savignyi	64.73	1.00e-161	561.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	45.43	2.00e-106	378.00
IUUC-Cne-026792	Cryptococcus neoformans	50.38	7.00e-125	439.00
IUUC-Cme-027307	Cyanidioschyzon merolae	49.18	2.00e-120	425.00
IUUC-Dre-028742	Danio rerio	67.50	9.00e-164	568.00
IUUC-Dno-029114	Dasypus novemcinctus	68.25	6.00e-166	575.00
IUUC-Dor-030733	Dipodomys ordii	57.50	6.00e-132	462.00
IUUC-Dse-031282	Dothistroma septosporum	44.30	3.00e-97	348.00
IUUC-Dme-032126	Drosophila melanogaster	66.34	4.00e-164	569.00
IUUC-Ete-032731	Echinops telfairi	68.25	6.00e-166	575.00
IUUC-Eca-033533	Equus caballus	67.00	7.00e-161	559.00
IUUC-Eeu-034644	Erinaceus europaeus	62.78	2.00e-79	288.00
IUUC-Fca-036202	Felis catus	68.25	6.00e-166	575.00
IUUC-Fal-037084	Ficedula albicollis	68.25	9.00e-166	575.00
IUUC-Fox-037974	Fusarium oxysporum	47.34	5.00e-113	400.00
IUUC-Fso-038246	Fusarium solani	46.15	8.00e-102	362.00
IUUC-Gmo-039214	Gadus morhua	67.83	7.00e-164	569.00
IUUC-Ggr-039741	Gaeumannomyces graminis	47.70	4.00e-109	387.00
IUUC-Gga-040396	Gallus gallus	68.25	6.00e-166	575.00
IUUC-Gac-041389	Gasterosteus aculeatus	67.33	5.00e-163	566.00
IUUC-Gma-042791	Glycine max	92.67	0.00e+00	800.00
IUUC-Ggo-045422	Gorilla gorilla	63.03	2.00e-144	504.00
IUUC-Hsa-045683	Homo sapiens	68.25	6.00e-166	575.00
IUUC-Hvu-047457	Hordeum vulgare	90.95	9.00e-109	384.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	68.25	6.00e-166	575.00
IUUC-Kpa-049119	Komagataella pastoris	36.95	2.00e-72	265.00
IUUC-Lch-050545	Latimeria chalumnae	67.57	4.00e-166	576.00
IUUC-Lpe-051337	Leersia perrieri	87.53	0.00e+00	763.00
IUUC-Loc-052473	Lepisosteus oculatus	67.50	2.00e-164	571.00
IUUC-Lma-053275	Leptosphaeria maculans	43.55	2.00e-66	244.00
IUUC-Laf-054114	Loxodonta africana	68.25	6.00e-166	575.00
IUUC-Mcc-055648	Macaca mulatta	68.25	7.00e-166	575.00
IUUC-Meu-056490	Macropus eugenii	68.25	6.00e-166	575.00
IUUC-Mor-056947	Magnaporthe oryzae	47.58	6.00e-106	376.00
IUUC-Mpo-057602	Magnaporthe poae	47.70	2.00e-109	388.00
IUUC-Mtr-057853	Medicago truncatula	91.16	0.00e+00	771.00
IUUC-Mla-058884	Melampsora laricipopulina	50.38	1.00e-119	422.00
IUUC-Mga-059452	Meleagris gallopavo	68.25	7.00e-166	575.00
IUUC-Mvi-060450	Microbotryum violaceum	53.85	1.00e-126	445.00
IUUC-Mmr-061008	Microcebus murinus	66.75	3.00e-161	560.00
IUUC-Mdo-062817	Monodelphis domestica	67.32	2.00e-164	571.00
IUUC-Mmu-063282	Mus musculus	68.25	6.00e-166	575.00
IUUC-Mac-065480	Musa acuminata	87.74	0.00e+00	769.00
IUUC-Mpu-066529	Mustela putorius furo	67.75	2.00e-164	571.00
IUUC-Mlu-068072	Myotis lucifugus	68.25	6.00e-166	575.00
IUUC-Nfi-068374	Neosartorya fischeri	48.53	9.00e-111	392.00
IUUC-Ncr-068794	Neurospora crassa	45.91	2.00e-107	381.00
IUUC-Nle-069577	Nomascus leucogenys	68.25	6.00e-166	575.00
IUUC-Opr-070245	Ochotona princeps	55.50	1.00e-124	439.00
IUUC-Ont-071809	Oreochromis niloticus	67.75	3.00e-164	570.00
IUUC-Oan-072839	Ornithorhynchus anatinus	68.08	2.00e-164	571.00
IUUC-Ocu-074778	Oryctolagus cuniculus	66.75	9.00e-162	562.00
IUUC-Oba-075719	Oryza barthii	75.78	0.00e+00	658.00
IUUC-Obr-076859	Oryza brachyantha	87.32	0.00e+00	758.00
IUUC-Ogl-077920	Oryza glaberrima	87.53	0.00e+00	761.00
IUUC-Ogu-078048	Oryza glumaepatula	75.30	0.00e+00	655.00
IUUC-Oin-079960	Oryza indica	72.88	4.00e-178	617.00
IUUC-Olo-080553	Oryza longistaminata	72.64	0.00e+00	641.00
IUUC-Ome-081835	Oryza meridionalis	87.53	0.00e+00	765.00
IUUC-Oni-082494	Oryza nivara	75.06	0.00e+00	651.00
IUUC-Opu-083913	Oryza punctata	83.86	0.00e+00	714.00
IUUC-Oru-084666	Oryza rufipogon	87.53	0.00e+00	761.00
IUUC-Osa-085884	Oryza sativa	87.53	0.00e+00	761.00
IUUC-Ola-086664	Oryzias latipes	67.75	2.00e-164	570.00
IUUC-Olu-087579	Ostreococcus lucimarinus	67.68	5.00e-161	559.00
IUUC-Oga-088364	Otolemur garnettii	64.68	3.00e-152	530.00
IUUC-Oar-089652	Ovis aries	68.25	6.00e-166	575.00
IUUC-Ptr-091598	Pan troglodytes	66.75	2.00e-161	561.00
IUUC-Pan-092412	Papio anubis	66.75	7.00e-162	562.00
IUUC-Psi-093300	Pelodiscus sinensis	66.75	9.00e-153	532.00
IUUC-Pma-094307	Petromyzon marinus	65.84	2.00e-163	567.00
IUUC-Pno-095153	Phaeosphaeria nodorum	46.10	6.00e-101	360.00
IUUC-Ppa-095800	Physcomitrella patens	77.78	0.00e+00	676.00
IUUC-Pfo-097376	Poecilia formosa	67.58	5.00e-163	566.00
IUUC-Pab-097697	Pongo abelii	68.25	6.00e-166	575.00
IUUC-Pop-100045	Populus trichocarpa	93.87	0.00e+00	816.00
IUUC-Pca-100642	Procavia capensis	60.10	4.00e-138	483.00
IUUC-Ppe-101212	Prunus persica	95.67	0.00e+00	818.00
IUUC-Pva-102253	Pteropus vampyrus	68.25	6.00e-166	575.00
IUUC-Pgr-103441	Puccinia graminis	49.51	2.00e-116	411.00
IUUC-Pte-104332	Pyrenophora teres	45.23	6.00e-102	363.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	45.23	8.00e-102	363.00
IUUC-Rno-105678	Rattus norvegicus	68.25	6.00e-166	575.00
IUUC-Sce-106364	Saccharomyces cerevisiae	36.11	8.00e-68	249.00
IUUC-Sha-106663	Sarcophilus harrisii	68.25	8.00e-166	575.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	47.51	6.00e-105	373.00
IUUC-Spo-108145	Schizosaccharomyces pombe	47.16	3.00e-107	380.00
IUUC-Smo-109159	Selaginella moellendorffii	76.39	0.00e+00	677.00
IUUC-Sit-110144	Setaria italica	88.32	0.00e+00	735.00
IUUC-Sly-111680	Solanum lycopersicum	93.62	0.00e+00	816.00
IUUC-Stu-111931	Solanum tuberosum	94.63	0.00e+00	798.00
IUUC-Sar-113236	Sorex araneus	60.50	2.00e-138	484.00
IUUC-Sbi-114637	Sorghum bicolor	87.83	0.00e+00	762.00
IUUC-Sre-114980	Sporisorium reilianum	50.99	7.00e-129	452.00
IUUC-Ssc-116352	Sus scrofa	66.50	3.00e-161	560.00
IUUC-Tgu-116925	Taeniopygia guttata	68.00	1.00e-165	574.00
IUUC-Tru-117549	Takifugu rubripes	67.41	8.00e-162	562.00
IUUC-Tsy-118854	Tarsius syrichta	66.75	3.00e-161	560.00
IUUC-Tni-120398	Tetraodon nigroviridis	67.66	4.00e-164	570.00
IUUC-Tre-122190	Trichoderma reesei	47.57	8.00e-105	372.00
IUUC-Tvi-122304	Trichoderma virens	47.58	9.00e-113	399.00
IUUC-Tae-124648	Triticum aestivum	87.80	0.00e+00	738.00
IUUC-Tur-126850	Triticum urartu	78.79	2.00e-167	581.00
IUUC-Tme-126949	Tuber melanosporum	50.25	5.00e-119	420.00
IUUC-Tbe-128010	Tupaia belangeri	60.00	2.00e-137	481.00
IUUC-Ttr-128558	Tursiops truncatus	60.75	1.00e-140	491.00
IUUC-Uma-129424	Ustilago maydis	51.24	1.00e-130	458.00
IUUC-Vda-129873	Verticillium dahliae	46.12	1.00e-110	392.00
IUUC-Vpa-130079	Vicugna pacos	67.75	3.00e-164	570.00
IUUC-Vvi-131585	Vitis vinifera	94.81	0.00e+00	823.00
IUUC-Xtr-132005	Xenopus tropicalis	68.06	9.00e-166	575.00
IUUC-Xma-133066	Xiphophorus maculatus	67.75	3.00e-164	570.00
IUUC-Yli-134334	Yarrowia lipolytica	38.19	8.00e-78	283.00
IUUC-Zma-135873	Zea mays	87.83	0.00e+00	736.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence