iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049209

Ensembl Protein ID

CAY70837

UniProt Accession

C4R5K1; C4R5K1_KOMPG

Genbank Protein ID

CAY70837.1

Protein Name

Nucleolar protein, component of the small subunit (SSU) processome

Genbank Nucleotide ID

FN392321

Gene Name

PAS_chr3_0782

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr3_0782	CAY70837	CAY70837

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-46	150.3	513	552
UBD/Beta-Prp	6.50e-87	289.5	469	680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+ + ++++f   d+l+v++s+D+t+kvW+l  +++lk+
   Q: 513  GHKRGLWDIRFclYDKLIVTASGDKTCKVWSLQNFTCLKT 552
           899999*****9877*******************999985 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
           + +h++ i++++++p+++++at+s+d+t kvw ++tg ++  l+gh+ + ++++f   +k++vt+s D+t kvw+l++++c+ tl+gh++sv  ++f+ ++
   Q: 469  RRAHEKEINAIDVAPNDQFFATASYDKTAKVWHIDTGETVGILKGHKRGLWDIRFCLYDKLIVTASGDKTCKVWSLQNFTCLKTLEGHTNSVQRCQFFNKN 569
           56778888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls........fdsngkelvsgs 199
           + +v++++d  i++wd ++g+c++ tl++hd  ++ ++++ dg+ +v++ +D++  +W   t+  l++ +++ + +v+  +         d n  +l++  
   Q: 570  NQIVTTGADGLIKIWDKSSGECIK-TLDNHDNRIWALCLKNDGFNFVTADADGKFSFWEDVTDATLKEEEENRKARVEQEQslanyvsnKDWNNAFLLALT 669
           888888888888888888888888.8888888888888888888888888888888887767766666655555555444433365444444558888888 PP
   S: 200  ldgtvklwdlq 210
           ld  +kl+ + 
   Q: 670  LDEPIKLYKVL 680
           88888888764 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MNSTSLRSTF AATDLEAIYV GGCAATMNEV GTILATAVEE DVVISNVETN TVLHRLEGDG 60
EIVTALQLTP DGRYLGVVSQ SQQLRIFNLE SEQFVTNFKL SSPAYIAAVD PTSTLFAFGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATAGTA CAAGTTTGAG GTCTACATTT GCGGCCACCG ATTTGGAGGC TATTTATGTA 60
GGAGGATGTG CTGCCACGAT GAACGAAGTC GGTACGATAC TGGCTACCGC AGTCGAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

ppa:PAS_chr3_0782

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	30.20	6.00e-97	346.00
IUUC-Aml-002376	Ailuropoda melanoleuca	31.63	1.00e-109	388.00
IUUC-Atr-002486	Amborella trichopoda	32.12	1.00e-113	401.00
IUUC-Apl-003519	Anas platyrhynchos	33.88	6.00e-107	379.00
IUUC-Aca-004957	Anolis carolinensis	37.50	2.00e-40	157.00
IUUC-Aly-006152	Arabidopsis lyrata	30.71	7.00e-107	379.00
IUUC-Ath-006966	Arabidopsis thaliana	30.35	2.00e-105	374.00
IUUC-Ago-007746	Ashbya gossypii	53.40	0.00e+00	826.00
IUUC-Acl-008009	Aspergillus clavatus	31.87	3.00e-132	464.00
IUUC-Afl-008681	Aspergillus flavus	31.18	1.00e-118	418.00
IUUC-Afu-008798	Aspergillus fumigatus	30.62	2.00e-116	411.00
IUUC-Ani-009278	Aspergillus nidulans	31.20	1.00e-129	455.00
IUUC-Ang-009640	Aspergillus niger	31.78	1.00e-132	464.00
IUUC-Aor-010160	Aspergillus oryzae	30.97	9.00e-118	416.00
IUUC-Ate-010320	Aspergillus terreus	31.63	3.00e-130	457.00
IUUC-Bgr-012054	Blumeria graminis	30.48	2.00e-118	418.00
IUUC-Bta-012611	Bos taurus	32.66	4.00e-109	386.00
IUUC-Bci-013797	Botrytis cinerea	32.77	2.00e-134	471.00
IUUC-Bdi-014384	Brachypodium distachyon	30.43	2.00e-111	394.00
IUUC-Bol-015097	Brassica oleracea	31.52	1.00e-102	365.00
IUUC-Bra-017798	Brassica rapa	31.52	4.00e-102	363.00
IUUC-Cel-018664	Caenorhabditis elegans	28.43	8.00e-90	322.00
IUUC-Cja-019092	Callithrix jacchus	32.79	8.00e-115	405.00
IUUC-Cfa-021040	Canis familiaris	32.07	2.00e-112	397.00
IUUC-Cpo-022529	Cavia porcellus	32.20	2.00e-105	374.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	50.75	1.00e-40	155.00
IUUC-Csa-024205	Chlorocebus sabaeus	32.66	2.00e-115	407.00
IUUC-Cin-025560	Ciona intestinalis	30.57	2.00e-97	347.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	33.22	5.00e-138	483.00
IUUC-Cne-027082	Cryptococcus neoformans	29.42	8.00e-112	396.00
IUUC-Cme-027159	Cyanidioschyzon merolae	22.46	6.00e-27	114.00
IUUC-Dre-028138	Danio rerio	29.94	1.00e-84	305.00
IUUC-Dno-029914	Dasypus novemcinctus	30.17	2.00e-71	261.00
IUUC-Dor-030685	Dipodomys ordii	32.24	1.00e-74	272.00
IUUC-Dse-031429	Dothistroma septosporum	31.47	1.00e-130	459.00
IUUC-Dme-031995	Drosophila melanogaster	26.76	2.00e-76	278.00
IUUC-Ete-033086	Echinops telfairi	35.89	2.00e-76	278.00
IUUC-Eca-034354	Equus caballus	32.87	6.00e-108	383.00
IUUC-Eeu-034832	Erinaceus europaeus	34.92	1.00e-76	278.00
IUUC-Fca-036136	Felis catus	31.62	2.00e-107	381.00
IUUC-Fal-036859	Ficedula albicollis	32.59	2.00e-111	394.00
IUUC-Fox-037863	Fusarium oxysporum	32.28	5.00e-122	429.00
IUUC-Fso-038389	Fusarium solani	31.99	3.00e-133	467.00
IUUC-Gmo-038711	Gadus morhua	29.06	2.00e-83	301.00
IUUC-Ggr-039820	Gaeumannomyces graminis	31.68	2.00e-126	444.00
IUUC-Gga-040263	Gallus gallus	32.63	6.00e-111	392.00
IUUC-Gac-041291	Gasterosteus aculeatus	30.86	7.00e-111	392.00
IUUC-Gma-044026	Glycine max	31.91	1.00e-115	409.00
IUUC-Ggo-044693	Gorilla gorilla	33.04	2.00e-114	404.00
IUUC-Hsa-046048	Homo sapiens	33.04	5.00e-115	406.00
IUUC-Hvu-047608	Hordeum vulgare	31.14	2.00e-111	394.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	32.58	7.00e-117	412.00
IUUC-Lch-050085	Latimeria chalumnae	30.54	6.00e-97	346.00
IUUC-Lpe-050945	Leersia perrieri	30.95	4.00e-108	383.00
IUUC-Loc-052679	Lepisosteus oculatus	31.32	4.00e-117	413.00
IUUC-Laf-053685	Loxodonta africana	31.35	6.00e-104	369.00
IUUC-Mcc-055861	Macaca mulatta	32.79	2.00e-113	401.00
IUUC-Meu-056820	Macropus eugenii	28.93	2.00e-78	285.00
IUUC-Mor-057234	Magnaporthe oryzae	31.95	4.00e-127	447.00
IUUC-Mpo-057456	Magnaporthe poae	32.29	9.00e-98	348.00
IUUC-Mtr-058122	Medicago truncatula	32.33	4.00e-117	413.00
IUUC-Mla-058980	Melampsora laricipopulina	29.66	4.00e-92	330.00
IUUC-Mga-060080	Meleagris gallopavo	32.31	3.00e-108	384.00
IUUC-Mvi-060338	Microbotryum violaceum	32.08	1.00e-123	435.00
IUUC-Mmr-060762	Microcebus murinus	32.45	2.00e-110	391.00
IUUC-Mdo-061975	Monodelphis domestica	31.70	1.00e-102	365.00
IUUC-Mmu-064038	Mus musculus	32.15	3.00e-107	380.00
IUUC-Mac-065189	Musa acuminata	30.48	2.00e-110	391.00
IUUC-Mpu-066526	Mustela putorius furo	32.28	2.00e-107	381.00
IUUC-Mlu-067716	Myotis lucifugus	32.58	2.00e-119	421.00
IUUC-Nfi-068474	Neosartorya fischeri	30.94	5.00e-122	430.00
IUUC-Ncr-068826	Neurospora crassa	31.95	5.00e-123	433.00
IUUC-Nle-069832	Nomascus leucogenys	32.91	8.00e-117	412.00
IUUC-Opr-071183	Ochotona princeps	31.85	7.00e-108	382.00
IUUC-Ont-072371	Oreochromis niloticus	31.03	3.00e-103	367.00
IUUC-Oan-073491	Ornithorhynchus anatinus	28.57	4.00e-79	286.00
IUUC-Oba-075963	Oryza barthii	30.81	1.00e-111	395.00
IUUC-Obr-076173	Oryza brachyantha	31.69	1.00e-111	395.00
IUUC-Ogl-077692	Oryza glaberrima	30.81	1.00e-111	395.00
IUUC-Ogu-078965	Oryza glumaepatula	30.94	9.00e-112	395.00
IUUC-Oin-079708	Oryza indica	30.68	8.00e-111	392.00
IUUC-Olo-080679	Oryza longistaminata	30.68	3.00e-110	390.00
IUUC-Oni-082960	Oryza nivara	30.68	6.00e-111	392.00
IUUC-Opu-083282	Oryza punctata	31.07	1.00e-108	385.00
IUUC-Oru-085224	Oryza rufipogon	30.81	1.00e-111	395.00
IUUC-Osa-085320	Oryza sativa	30.81	1.00e-111	395.00
IUUC-Ola-086370	Oryzias latipes	38.24	2.00e-40	158.00
IUUC-Olu-087814	Ostreococcus lucimarinus	27.52	2.00e-79	288.00
IUUC-Oga-088458	Otolemur garnettii	31.81	2.00e-117	414.00
IUUC-Oar-090032	Ovis aries	30.37	2.00e-81	294.00
IUUC-Ptr-090749	Pan troglodytes	32.91	3.00e-113	400.00
IUUC-Pan-091691	Papio anubis	32.16	5.00e-106	376.00
IUUC-Psi-093200	Pelodiscus sinensis	30.41	5.00e-104	370.00
IUUC-Pma-094165	Petromyzon marinus	30.20	2.00e-74	271.00
IUUC-Pno-095048	Phaeosphaeria nodorum	33.65	9.00e-110	389.00
IUUC-Ppa-095336	Physcomitrella patens	31.50	3.00e-109	387.00
IUUC-Pfo-096132	Poecilia formosa	30.72	6.00e-99	353.00
IUUC-Pab-097855	Pongo abelii	32.91	6.00e-117	412.00
IUUC-Pop-099858	Populus trichocarpa	30.89	5.00e-105	373.00
IUUC-Pca-100232	Procavia capensis	36.18	1.00e-42	166.00
IUUC-Ppe-101665	Prunus persica	31.27	7.00e-112	396.00
IUUC-Pva-102178	Pteropus vampyrus	32.91	3.00e-111	394.00
IUUC-Pgr-103288	Puccinia graminis	27.81	5.00e-77	280.00
IUUC-Ptt-103808	Puccinia triticina	29.12	9.00e-77	279.00
IUUC-Pte-104205	Pyrenophora teres	34.44	6.00e-133	466.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	33.56	2.00e-122	431.00
IUUC-Rno-105617	Rattus norvegicus	32.28	2.00e-108	384.00
IUUC-Sce-106281	Saccharomyces cerevisiae	51.21	0.00e+00	794.00
IUUC-Sha-107378	Sarcophilus harrisii	31.03	1.00e-103	368.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.99	5.00e-137	479.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.33	2.00e-124	437.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	32.73	5.00e-141	493.00
IUUC-Smo-109257	Selaginella moellendorffii	31.53	4.00e-117	413.00
IUUC-Sit-110258	Setaria italica	31.35	2.00e-117	414.00
IUUC-Sly-111521	Solanum lycopersicum	31.76	6.00e-112	396.00
IUUC-Sbi-114768	Sorghum bicolor	31.23	8.00e-115	405.00
IUUC-Sre-115159	Sporisorium reilianum	32.15	4.00e-89	320.00
IUUC-Ssc-116342	Sus scrofa	25.83	3.00e-47	181.00
IUUC-Tgu-117320	Taeniopygia guttata	31.61	9.00e-103	365.00
IUUC-Tru-118024	Takifugu rubripes	30.77	5.00e-108	383.00
IUUC-Tni-119971	Tetraodon nigroviridis	31.05	3.00e-109	387.00
IUUC-Tca-121248	Theobroma cacao	31.01	5.00e-105	373.00
IUUC-Tre-122079	Trichoderma reesei	34.56	2.00e-133	468.00
IUUC-Tvi-122554	Trichoderma virens	33.89	8.00e-132	462.00
IUUC-Tae-123690	Triticum aestivum	31.17	9.00e-112	395.00
IUUC-Tur-126436	Triticum urartu	30.05	7.00e-90	322.00
IUUC-Tme-126942	Tuber melanosporum	34.15	9.00e-133	465.00
IUUC-Ttr-128964	Tursiops truncatus	31.29	6.00e-110	389.00
IUUC-Uma-129473	Ustilago maydis	30.13	2.00e-93	335.00
IUUC-Vda-129749	Verticillium dahliae	33.50	3.00e-125	440.00
IUUC-Vvi-131511	Vitis vinifera	30.81	2.00e-110	391.00
IUUC-Xtr-132816	Xenopus tropicalis	28.11	2.00e-76	278.00
IUUC-Xma-133672	Xiphophorus maculatus	30.47	2.00e-104	371.00
IUUC-Yli-134602	Yarrowia lipolytica	42.71	0.00e+00	648.00
IUUC-Zma-135559	Zea mays	31.85	7.00e-112	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence