iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002643

Ensembl Protein ID

ERN17959

UniProt Accession

U5D688; U5D688_AMBTC

Genbank Protein ID

ERN17959.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392290

Gene Name

AMTR_s00046p00080660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00046p00080660	ERN17959	ERN17959

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-06	27.6	173	213
UBD/ZnF/ZnF_UBP	7.60e-27	93.8	223	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle++++     l++ C+H fh +C  kw        ++ +CP+Cr
   Q: 173  CPVCLERLDQDisgILTTMCNHSFHGSCTAKW--------TNSSCPVCR 213
           ********55334488899*************........9999****8 PP

UBD/ZnF/ZnF_UBP

   S: 2    kcsvcdktenlWlcLtcgsvgCGRyvegHalkHyeetqhplvlslstlsvycYacddyvhr 62
            cs+c++ enlW+c++cg+vgCGRy+egHa++H++etqh+++l+l++++v++Y++d+ vhr
   Q: 223  SCSICETLENLWICIICGFVGCGRYKEGHAIRHWKETQHCYSLDLENQRVWDYVGDKHVHR 283
           6**********************************************************96 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MFTLSIHSVE IPFSTTKYGD ASSSPTSTHS LFFFSGNPRF QESKGIIHLF RNVSDLPASP 60
DALPEGRSTL VCVLAVPNHI TYAEFFQFSG SFAEHMLEMR VIRNDGMDDR YSVLVMFENQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCACTC TTAGTATACA CTCTGTTGAG ATTCCATTTT CAACAACAAA ATATGGAGAT 60
GCTTCCTCCT CTCCTACTTC TACTCATTCA CTCTTCTTCT TCTCTGGAAA CCCTAGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011422--BRAP2
IPR033273--BRIZ1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50089--ZF_RING_2
PS50271--ZF_UBP

Pfam

PF07576--BRAP2
PF13639--zf-RING_2
PF02148--zf-UBP

SMART

SM00184--RING
SM00290--ZnF_UBP

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0010029--P:regulation of seed germination

KEGG

atr:18446308

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000519	Aegilops tauschii	48.48	2.00e-118	418.00
IUUC-Cin-025326	Ciona intestinalis	34.44	2.00e-70	258.00
IUUC-Hvu-047475	Hordeum vulgare	52.22	2.00e-85	307.00
IUUC-Lpe-050777	Leersia perrieri	49.90	2.00e-143	501.00
IUUC-Mtr-058559	Medicago truncatula	49.69	1.00e-135	475.00
IUUC-Oba-075084	Oryza barthii	51.97	7.00e-142	496.00
IUUC-Ogl-077482	Oryza glaberrima	49.59	3.00e-141	493.00
IUUC-Ogu-078968	Oryza glumaepatula	51.97	7.00e-142	496.00
IUUC-Olo-080753	Oryza longistaminata	54.55	2.00e-129	454.00
IUUC-Ome-081756	Oryza meridionalis	51.97	6.00e-142	496.00
IUUC-Oni-082434	Oryza nivara	51.97	8.00e-142	496.00
IUUC-Opu-083262	Oryza punctata	51.43	8.00e-140	489.00
IUUC-Oru-084381	Oryza rufipogon	51.97	7.00e-142	496.00
IUUC-Osa-085498	Oryza sativa	51.64	2.00e-141	494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence