iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057716

Ensembl Protein ID

KEH32196

UniProt Accession

A0A072US66; A0A072US66_MEDTR

Genbank Protein ID

KEH32196.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g117250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g117250	KEH32196	KEH32196

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	30.68	6.00e-25	111.00	IUUC-Cel-018246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGGSWSNNNS NNRNISRRRH NSYHEHYPPP PYYYYSSQPQ PLMPQPQPQP QPPQGYFPPH 60
QYYSNGYTPA NSMLPQPHHP FYATTNTQPL DIDVNVVQAL PPPPPYTDHE TAKKVRNDVN 120

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Nucleotide Sequence
(Fasta)

AAAAGATGAA AAGGGAAACA AGGATTAAAA ATTGGCAAGT GGTGTTTTGT GTTGGTGGAA 60
AAGAAAAAAG AATTGGATCT GGAGTTGACA CACACCATCC TGTTCCAATT CAGTTGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g117250

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002988	Amborella trichopoda	55.21	1.00e-78	285.00
IUUC-Aly-006094	Arabidopsis lyrata	59.22	3.00e-81	293.00
IUUC-Ath-006717	Arabidopsis thaliana	59.02	9.00e-80	289.00
IUUC-Afu-008875	Aspergillus fumigatus	32.73	8.00e-06	45.80
IUUC-Ani-009224	Aspergillus nidulans	38.60	3.00e-07	49.30
IUUC-Ang-009625	Aspergillus niger	34.62	3.00e-06	47.40
IUUC-Ame-011921	Astyanax mexicanus	32.87	2.00e-30	126.00
IUUC-Bdi-014389	Brachypodium distachyon	54.58	2.00e-78	285.00
IUUC-Bol-015239	Brassica oleracea	58.91	6.00e-82	296.00
IUUC-Bra-017202	Brassica rapa	60.47	7.00e-85	306.00
IUUC-Cel-018246	Caenorhabditis elegans	30.68	2.00e-29	123.00
IUUC-Csa-023582	Chlorocebus sabaeus	34.51	1.00e-34	140.00
IUUC-Cho-025077	Choloepus hoffmanni	32.49	9.00e-28	117.00
IUUC-Cin-025185	Ciona intestinalis	28.62	1.00e-23	103.00
IUUC-Cne-026964	Cryptococcus neoformans	35.06	7.00e-09	55.10
IUUC-Gga-041217	Gallus gallus	32.19	3.00e-34	139.00
IUUC-Gma-044389	Glycine max	73.73	2.00e-112	397.00
IUUC-Hvu-047318	Hordeum vulgare	54.65	3.00e-78	284.00
IUUC-Lma-053195	Leptosphaeria maculans	35.59	1.00e-05	44.30
IUUC-Mga-060147	Meleagris gallopavo	31.99	1.00e-33	137.00
IUUC-Mvi-060417	Microbotryum violaceum	37.88	4.00e-07	49.70
IUUC-Mac-064637	Musa acuminata	54.89	4.00e-78	283.00
IUUC-Oba-075139	Oryza barthii	53.70	4.00e-76	277.00
IUUC-Oin-079339	Oryza indica	54.09	1.00e-76	279.00
IUUC-Opu-083704	Oryza punctata	54.47	3.00e-77	281.00
IUUC-Osa-086018	Oryza sativa	54.47	4.00e-77	280.00
IUUC-Pop-099780	Populus trichocarpa	53.33	6.00e-87	313.00
IUUC-Pyt-104665	Pyrenophora triticirepentis	36.84	5.00e-05	41.60
IUUC-Tca-121006	Theobroma cacao	66.67	2.00e-105	374.00
IUUC-Yli-134469	Yarrowia lipolytica	30.67	8.00e-06	45.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence