iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057977

Ensembl Protein ID

AES91904

UniProt Accession

G7JLK9; G7JLK9_MEDTR

Genbank Protein ID

AES91904.1

Protein Name

Transducin family protein/WD-40 repeat protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g120740

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g120740	AES91904	AES91904

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-07	31.5	6	34

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtcl..af.sd.tllvsGsdDgtikvWD 29
           +++++  af ++ ++++ +++Dg ik+WD
   Q: 6    DIRGIltAFnPSlDFFAISTGDGRIKIWD 34
           57776557898889999999********* PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAASADIRGI LTAFNPSLDF FAISTGDGRI KIWDALKGQV QTEFADITST HETNIFDQKG 60
HLSVDYTCIK WLSFQSKRKR KHSSSSLLLL GTGSGDVLAL DVSAGQLSWK INDCHPGGVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAGTATTA CACCCCCCAT ACACTTATAA TTGGGCCTAA ACCTAGCAAG ACAGTTATAA 60
ACCAACCCGG CCCATTATTG TTTTCCCTCT TTTCTTCTCT TCTCTAACTC TGCTGCAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

mtr:MTR_4g120740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	21.67	3.00e-20	93.20
IUUC-Atr-002533	Amborella trichopoda	45.41	2.00e-137	482.00
IUUC-Apl-003242	Anas platyrhynchos	21.28	4.00e-13	69.30
IUUC-Aca-004607	Anolis carolinensis	21.25	4.00e-19	89.40
IUUC-Aly-006074	Arabidopsis lyrata	53.18	5.00e-159	553.00
IUUC-Ath-007222	Arabidopsis thaliana	55.09	1.00e-156	545.00
IUUC-Ame-011014	Astyanax mexicanus	25.77	2.00e-18	87.00
IUUC-Bta-012605	Bos taurus	21.84	1.00e-20	94.00
IUUC-Bdi-014072	Brachypodium distachyon	46.31	9.00e-139	486.00
IUUC-Bol-016255	Brassica oleracea	54.17	8.00e-180	623.00
IUUC-Bra-017484	Brassica rapa	54.85	6.00e-174	603.00
IUUC-Cja-019620	Callithrix jacchus	22.30	4.00e-21	95.90
IUUC-Cfa-020520	Canis familiaris	21.35	9.00e-19	88.20
IUUC-Cpo-022456	Cavia porcellus	21.73	1.00e-20	94.70
IUUC-Cho-024726	Choloepus hoffmanni	23.62	4.00e-15	76.30
IUUC-Cin-025761	Ciona intestinalis	25.00	5.00e-12	65.90
IUUC-Dre-028051	Danio rerio	26.32	4.00e-20	92.40
IUUC-Dno-030031	Dasypus novemcinctus	21.52	5.00e-19	89.00
IUUC-Dme-031653	Drosophila melanogaster	21.22	2.00e-13	70.10
IUUC-Eca-033243	Equus caballus	21.36	6.00e-13	68.60
IUUC-Fca-036009	Felis catus	22.04	7.00e-21	95.10
IUUC-Fal-037264	Ficedula albicollis	21.29	1.00e-14	74.30
IUUC-Gmo-039124	Gadus morhua	23.80	6.00e-18	85.50
IUUC-Gga-040862	Gallus gallus	21.02	6.00e-18	85.50
IUUC-Gac-041468	Gasterosteus aculeatus	22.54	3.00e-23	102.00
IUUC-Gma-043981	Glycine max	72.48	0.00e+00	827.00
IUUC-Ggo-044432	Gorilla gorilla	22.46	2.00e-21	97.10
IUUC-Hsa-047036	Homo sapiens	22.46	2.00e-21	97.10
IUUC-Hvu-047736	Hordeum vulgare	29.87	2.00e-21	95.50
IUUC-Itr-048644	Ictidomys tridecemlineatus	21.12	7.00e-24	105.00
IUUC-Lch-049553	Latimeria chalumnae	22.52	4.00e-18	85.90
IUUC-Laf-053462	Loxodonta africana	22.44	8.00e-22	98.20
IUUC-Mcc-055239	Macaca mulatta	21.97	6.00e-20	92.00
IUUC-Mga-060079	Meleagris gallopavo	21.98	4.00e-11	62.40
IUUC-Mmr-061472	Microcebus murinus	22.37	4.00e-21	95.90
IUUC-Mdo-061972	Monodelphis domestica	20.99	7.00e-21	95.10
IUUC-Mmu-063354	Mus musculus	21.48	6.00e-21	95.50
IUUC-Mac-065064	Musa acuminata	55.29	8.00e-127	446.00
IUUC-Mpu-066877	Mustela putorius furo	21.51	2.00e-20	93.60
IUUC-Mlu-067476	Myotis lucifugus	21.25	6.00e-18	85.50
IUUC-Nle-069119	Nomascus leucogenys	22.30	2.00e-21	97.10
IUUC-Ont-072093	Oreochromis niloticus	22.83	2.00e-24	106.00
IUUC-Oan-072944	Ornithorhynchus anatinus	20.27	2.00e-12	66.60
IUUC-Ocu-074472	Oryctolagus cuniculus	21.05	1.00e-17	84.70
IUUC-Oba-075009	Oryza barthii	44.70	2.00e-130	458.00
IUUC-Ogl-077189	Oryza glaberrima	41.69	1.00e-128	452.00
IUUC-Oin-079064	Oryza indica	44.70	7.00e-130	457.00
IUUC-Opu-083604	Oryza punctata	45.25	1.00e-133	469.00
IUUC-Oru-084620	Oryza rufipogon	44.70	1.00e-129	456.00
IUUC-Osa-085345	Oryza sativa	44.70	7.00e-130	456.00
IUUC-Ola-086626	Oryzias latipes	22.33	3.00e-22	99.80
IUUC-Oga-087911	Otolemur garnettii	22.33	2.00e-19	90.50
IUUC-Ptr-091603	Pan troglodytes	22.30	4.00e-21	95.90
IUUC-Pan-092569	Papio anubis	21.97	6.00e-20	92.00
IUUC-Pma-094287	Petromyzon marinus	21.52	5.00e-21	95.50
IUUC-Ppa-095327	Physcomitrella patens	36.57	6.00e-69	254.00
IUUC-Pfo-097292	Poecilia formosa	25.47	2.00e-20	94.00
IUUC-Pab-097878	Pongo abelii	22.30	3.00e-21	96.70
IUUC-Pop-099418	Populus trichocarpa	60.24	0.00e+00	637.00
IUUC-Pca-100941	Procavia capensis	20.72	2.00e-13	70.90
IUUC-Ppe-101779	Prunus persica	63.70	0.00e+00	688.00
IUUC-Pva-102493	Pteropus vampyrus	24.74	1.00e-10	61.20
IUUC-Rno-105084	Rattus norvegicus	21.11	1.00e-19	90.90
IUUC-Sha-107486	Sarcophilus harrisii	22.08	9.00e-21	94.70
IUUC-Smo-108825	Selaginella moellendorffii	31.76	4.00e-61	228.00
IUUC-Sit-110825	Setaria italica	46.28	2.00e-141	495.00
IUUC-Sly-111365	Solanum lycopersicum	54.00	9.00e-168	582.00
IUUC-Stu-112812	Solanum tuberosum	53.83	2.00e-166	578.00
IUUC-Sar-113326	Sorex araneus	25.20	1.00e-13	70.90
IUUC-Sbi-114426	Sorghum bicolor	45.10	3.00e-143	501.00
IUUC-Tgu-116726	Taeniopygia guttata	21.58	4.00e-21	95.90
IUUC-Tru-117848	Takifugu rubripes	27.16	1.00e-18	87.80
IUUC-Tni-120591	Tetraodon nigroviridis	24.16	4.00e-20	92.40
IUUC-Tca-121576	Theobroma cacao	57.90	0.00e+00	635.00
IUUC-Tae-125648	Triticum aestivum	46.17	7.00e-141	493.00
IUUC-Tbe-127832	Tupaia belangeri	21.40	3.00e-14	72.80
IUUC-Ttr-128812	Tursiops truncatus	21.61	4.00e-13	69.30
IUUC-Xma-133557	Xiphophorus maculatus	25.67	9.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence