iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2374__AT3G21540.1	fgenesh2_kg.3__2374__AT3G21540.1	fgenesh2_kg.3__2374__AT3G21540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-43	145.9	146	184
UBD/Beta-Prp	3.60e-91	306.1	28	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f ++ + lvs+s D+ ++vWDl t+++ +
   Q: 146  GHRDQVTDLVFlDGgKKLVSSSKDKFLRVWDLETQHCMQ 184
           8**********97789*******************9986 PP

UBD/Beta-Prp

   S: 105  sgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           s+ k v + + + + +w++++g c ++        g + +v++++++  ++l++ G +D+ +r+Wd + g++   + 
   Q: 28   STGKHVLAPALEKVGIWHVRQGVCTKTlnpssSRGGPSLAVTSIASSA-SSLVAVGYADGSIRIWDCEKGTCEVNFN 103
           4567777888899*************6554432223333455555554.6*************************** PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrs 253
           + h+++v+ l +++ g  l+sgs+d++v+lwd+  ++ + +l+gh+d+v+++ f++ ++ lvs s+D+ +r+Wdl++
   Q: 104  S-HKGAVTALRYNKVGSMLASGSKDNDVILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET 179
           9.********************************9999*************************************** PP
   S: 254  gdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
           + +++ +++h+s v+sv++ +++++ +v+gs+d++++++++k+
   Q: 180  QHCMQIVSGHHSEVWSVDA-DPEERFVVTGSADQELRFYAVKE 221
           *******************.*******************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVKAYLRYEA ASSFGVISSV DSNITYDSTG KHVLAPALEK VGIWHVRQGV CTKTLNPSSS 60
RGGPSLAVTS IASSASSLVA VGYADGSIRI WDCEKGTCEV NFNSHKGAVT ALRYNKVGSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGG CTTACCTAAG ATACGAGGCA GCGTCCTCTT TCGGTGTGAT TTCATCTGTA 60
GATTCGAACA TAACTTACGA TTCGACGGGG AAGCATGTAC TTGCTCCGGC GTTGGAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

KEGG

aly:ARALYDRAFT_479673

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	57.16	0.00e+00	957.00
IUUC-Aml-001245	Ailuropoda melanoleuca	39.26	0.00e+00	629.00
IUUC-Atr-002700	Amborella trichopoda	60.22	0.00e+00	1084.00
IUUC-Apl-004164	Anas platyrhynchos	41.54	7.00e-147	513.00
IUUC-Aca-004765	Anolis carolinensis	39.49	5.00e-180	624.00
IUUC-Ath-006848	Arabidopsis thaliana	94.67	0.00e+00	1704.00
IUUC-Ago-007909	Ashbya gossypii	33.88	2.00e-154	539.00
IUUC-Acl-008238	Aspergillus clavatus	36.27	1.00e-164	573.00
IUUC-Afl-008544	Aspergillus flavus	35.60	4.00e-163	568.00
IUUC-Afu-008868	Aspergillus fumigatus	36.44	3.00e-163	568.00
IUUC-Ani-009367	Aspergillus nidulans	36.18	6.00e-165	574.00
IUUC-Ang-009732	Aspergillus niger	36.58	1.00e-167	583.00
IUUC-Aor-010140	Aspergillus oryzae	35.95	1.00e-165	576.00
IUUC-Ate-010572	Aspergillus terreus	36.03	1.00e-161	563.00
IUUC-Ame-010956	Astyanax mexicanus	43.60	3.00e-122	432.00
IUUC-Bgr-012296	Blumeria graminis	35.29	4.00e-157	548.00
IUUC-Bta-012716	Bos taurus	39.64	0.00e+00	650.00
IUUC-Bci-013699	Botrytis cinerea	34.79	4.00e-159	555.00
IUUC-Bdi-014525	Brachypodium distachyon	59.45	0.00e+00	1043.00
IUUC-Bol-015117	Brassica oleracea	83.02	0.00e+00	1438.00
IUUC-Bra-016869	Brassica rapa	82.08	0.00e+00	1418.00
IUUC-Cel-018570	Caenorhabditis elegans	28.63	3.00e-99	355.00
IUUC-Cja-019425	Callithrix jacchus	39.49	0.00e+00	632.00
IUUC-Cfa-020787	Canis familiaris	39.68	0.00e+00	632.00
IUUC-Cpo-021729	Cavia porcellus	39.55	5.00e-134	471.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	50.00	3.00e-123	435.00
IUUC-Csa-024098	Chlorocebus sabaeus	39.35	0.00e+00	634.00
IUUC-Cho-024495	Choloepus hoffmanni	35.86	3.00e-94	339.00
IUUC-Cin-025245	Ciona intestinalis	35.62	8.00e-107	380.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	36.32	3.00e-156	545.00
IUUC-Cne-026835	Cryptococcus neoformans	39.41	3.00e-111	395.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.02	8.00e-57	215.00
IUUC-Dre-027874	Danio rerio	40.60	0.00e+00	628.00
IUUC-Dno-028905	Dasypus novemcinctus	38.82	0.00e+00	637.00
IUUC-Dor-030383	Dipodomys ordii	36.12	2.00e-75	277.00
IUUC-Dse-031297	Dothistroma septosporum	34.42	5.00e-150	524.00
IUUC-Dme-031956	Drosophila melanogaster	35.04	2.00e-136	479.00
IUUC-Ete-032608	Echinops telfairi	35.71	8.00e-100	357.00
IUUC-Eca-034181	Equus caballus	39.77	0.00e+00	634.00
IUUC-Eeu-034495	Erinaceus europaeus	39.69	2.00e-176	612.00
IUUC-Fca-035994	Felis catus	41.62	5.00e-176	610.00
IUUC-Fal-036611	Ficedula albicollis	37.81	5.00e-169	587.00
IUUC-Fox-037807	Fusarium oxysporum	36.72	3.00e-162	565.00
IUUC-Fso-038090	Fusarium solani	35.93	1.00e-157	550.00
IUUC-Gmo-039018	Gadus morhua	38.45	1.00e-94	340.00
IUUC-Ggr-039748	Gaeumannomyces graminis	36.26	3.00e-162	565.00
IUUC-Gga-040707	Gallus gallus	39.57	1.00e-172	599.00
IUUC-Gac-042334	Gasterosteus aculeatus	35.25	7.00e-85	307.00
IUUC-Gma-043860	Glycine max	69.88	0.00e+00	1220.00
IUUC-Ggo-045334	Gorilla gorilla	39.01	3.00e-180	624.00
IUUC-Hsa-046996	Homo sapiens	38.98	0.00e+00	627.00
IUUC-Hvu-047381	Hordeum vulgare	54.23	3.00e-165	574.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.98	0.00e+00	629.00
IUUC-Kpa-049185	Komagataella pastoris	34.03	1.00e-155	543.00
IUUC-Lch-050098	Latimeria chalumnae	38.19	6.00e-158	551.00
IUUC-Lpe-050710	Leersia perrieri	58.68	0.00e+00	1045.00
IUUC-Loc-052745	Lepisosteus oculatus	38.20	2.00e-168	585.00
IUUC-Lma-053104	Leptosphaeria maculans	34.75	8.00e-159	555.00
IUUC-Laf-054395	Loxodonta africana	39.77	0.00e+00	637.00
IUUC-Mcc-055077	Macaca mulatta	39.79	0.00e+00	631.00
IUUC-Meu-056418	Macropus eugenii	40.88	4.00e-97	348.00
IUUC-Mor-057031	Magnaporthe oryzae	36.19	1.00e-147	516.00
IUUC-Mpo-057420	Magnaporthe poae	36.22	2.00e-157	549.00
IUUC-Mtr-057838	Medicago truncatula	67.69	0.00e+00	1254.00
IUUC-Mla-058854	Melampsora laricipopulina	32.80	2.00e-141	496.00
IUUC-Mga-060120	Meleagris gallopavo	40.15	6.00e-128	451.00
IUUC-Mvi-060407	Microbotryum violaceum	43.14	1.00e-141	496.00
IUUC-Mmr-060635	Microcebus murinus	39.83	0.00e+00	631.00
IUUC-Mdo-063023	Monodelphis domestica	40.11	0.00e+00	646.00
IUUC-Mmu-064103	Mus musculus	40.30	0.00e+00	651.00
IUUC-Mac-065569	Musa acuminata	63.28	0.00e+00	1179.00
IUUC-Mpu-066462	Mustela putorius furo	38.92	0.00e+00	634.00
IUUC-Mlu-067894	Myotis lucifugus	38.92	0.00e+00	633.00
IUUC-Nfi-068321	Neosartorya fischeri	36.11	2.00e-164	572.00
IUUC-Ncr-068661	Neurospora crassa	36.04	1.00e-155	543.00
IUUC-Nle-069409	Nomascus leucogenys	39.56	0.00e+00	629.00
IUUC-Opr-070445	Ochotona princeps	42.01	6.00e-122	431.00
IUUC-Ont-072339	Oreochromis niloticus	39.83	1.00e-173	602.00
IUUC-Oan-073688	Ornithorhynchus anatinus	40.43	0.00e+00	627.00
IUUC-Ocu-074227	Oryctolagus cuniculus	39.09	0.00e+00	635.00
IUUC-Oba-075635	Oryza barthii	59.00	0.00e+00	1005.00
IUUC-Obr-076897	Oryza brachyantha	59.60	0.00e+00	1073.00
IUUC-Ogl-077555	Oryza glaberrima	58.89	0.00e+00	1004.00
IUUC-Ogu-078724	Oryza glumaepatula	59.21	0.00e+00	1011.00
IUUC-Oin-080030	Oryza indica	58.89	0.00e+00	1004.00
IUUC-Olo-080687	Oryza longistaminata	55.62	0.00e+00	956.00
IUUC-Ome-081867	Oryza meridionalis	59.00	0.00e+00	1006.00
IUUC-Oni-082559	Oryza nivara	58.79	0.00e+00	1002.00
IUUC-Opu-083332	Oryza punctata	56.76	0.00e+00	917.00
IUUC-Oru-084455	Oryza rufipogon	59.00	0.00e+00	1007.00
IUUC-Osa-085793	Oryza sativa	59.00	0.00e+00	1007.00
IUUC-Ola-087395	Oryzias latipes	38.97	4.00e-160	558.00
IUUC-Olu-087768	Ostreococcus lucimarinus	43.21	0.00e+00	669.00
IUUC-Oga-088574	Otolemur garnettii	39.29	0.00e+00	630.00
IUUC-Oar-089453	Ovis aries	39.11	0.00e+00	649.00
IUUC-Ptr-090694	Pan troglodytes	39.09	0.00e+00	628.00
IUUC-Pan-092420	Papio anubis	39.26	5.00e-180	624.00
IUUC-Psi-093683	Pelodiscus sinensis	39.43	1.00e-179	623.00
IUUC-Pma-094197	Petromyzon marinus	36.80	1.00e-36	145.00
IUUC-Pno-094783	Phaeosphaeria nodorum	34.54	5.00e-154	537.00
IUUC-Ppa-095208	Physcomitrella patens	51.76	0.00e+00	888.00
IUUC-Pfo-096299	Poecilia formosa	40.89	0.00e+00	630.00
IUUC-Pab-098706	Pongo abelii	39.07	8.00e-180	623.00
IUUC-Pop-099275	Populus trichocarpa	70.92	0.00e+00	1269.00
IUUC-Pca-100796	Procavia capensis	32.64	8.00e-119	420.00
IUUC-Ppe-101861	Prunus persica	71.35	0.00e+00	1303.00
IUUC-Pva-103241	Pteropus vampyrus	37.96	6.00e-169	587.00
IUUC-Pgr-103432	Puccinia graminis	36.28	1.00e-147	516.00
IUUC-Ptt-103742	Puccinia triticina	39.47	1.00e-132	467.00
IUUC-Pte-104069	Pyrenophora teres	35.06	4.00e-151	528.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	34.85	1.00e-158	553.00
IUUC-Rno-105219	Rattus norvegicus	39.51	3.00e-179	621.00
IUUC-Sce-106271	Saccharomyces cerevisiae	35.34	1.00e-153	536.00
IUUC-Sha-107550	Sarcophilus harrisii	39.34	0.00e+00	630.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	35.85	1.00e-158	553.00
IUUC-Spo-108239	Schizosaccharomyces pombe	34.77	2.00e-160	558.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	35.21	7.00e-162	563.00
IUUC-Smo-109477	Selaginella moellendorffii	54.55	0.00e+00	947.00
IUUC-Sit-110000	Setaria italica	58.51	0.00e+00	1011.00
IUUC-Sly-111595	Solanum lycopersicum	68.32	0.00e+00	1177.00
IUUC-Stu-112516	Solanum tuberosum	68.75	0.00e+00	1182.00
IUUC-Sar-113195	Sorex araneus	43.45	2.00e-121	429.00
IUUC-Sbi-114465	Sorghum bicolor	58.16	0.00e+00	1024.00
IUUC-Sre-115006	Sporisorium reilianum	33.84	4.00e-150	525.00
IUUC-Ssc-115929	Sus scrofa	39.30	0.00e+00	634.00
IUUC-Tgu-117282	Taeniopygia guttata	38.25	8.00e-168	583.00
IUUC-Tru-118406	Takifugu rubripes	40.58	5.00e-173	600.00
IUUC-Tsy-119170	Tarsius syrichta	39.18	4.00e-180	624.00
IUUC-Tni-119721	Tetraodon nigroviridis	39.47	1.00e-167	583.00
IUUC-Tca-121761	Theobroma cacao	74.05	0.00e+00	1349.00
IUUC-Tre-121908	Trichoderma reesei	36.22	1.00e-160	560.00
IUUC-Tvi-122547	Trichoderma virens	36.91	8.00e-165	573.00
IUUC-Tae-123224	Triticum aestivum	59.15	0.00e+00	1023.00
IUUC-Tur-126811	Triticum urartu	61.18	0.00e+00	1014.00
IUUC-Tme-126987	Tuber melanosporum	37.51	8.00e-176	610.00
IUUC-Tbe-127315	Tupaia belangeri	42.26	4.00e-106	378.00
IUUC-Ttr-129165	Tursiops truncatus	35.06	6.00e-142	497.00
IUUC-Uma-129651	Ustilago maydis	34.95	1.00e-151	530.00
IUUC-Vda-129973	Verticillium dahliae	35.88	6.00e-153	534.00
IUUC-Vpa-130163	Vicugna pacos	34.44	3.00e-66	246.00
IUUC-Vvi-131402	Vitis vinifera	71.74	0.00e+00	1288.00
IUUC-Xtr-132296	Xenopus tropicalis	39.64	4.00e-178	617.00
IUUC-Xma-133028	Xiphophorus maculatus	40.62	2.00e-179	622.00
IUUC-Yli-134484	Yarrowia lipolytica	36.35	3.00e-152	531.00
IUUC-Zma-135938	Zea mays	57.20	0.00e+00	1025.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence