iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007481

UUCD1 version

UUC-ArT-01149

Ensembl Protein ID

AT3G43430.1

UniProt Accession

Q9M176; Q9M176_ARATH

Genbank Protein ID

AEE77792.1; BAD43130.1; CAB81584.1

Protein Name

Putative uncharacterized protein At3g43430; Putative uncharacterized protein T5C2_130; RING/U-box superfamily protein

Genbank Nucleotide ID

CP002686; AK175367; AL138664

Gene Name

T5C2_130; At3g43430

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G43430	AT3G43430.1	AT3G43430.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	32.7	83	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkw.....pglknssskefrCPlCr 46
           Ca+Cl d+  +d+ + l+ C Hvfh+dC+ +w      g      ++ +CPlCr
   Q: 83   CAVCLGDLedEDEIRELRnCTHVFHRDCIDRWldyecCGGD--DDNHRTCPLCR 134
           ********55444776667*************998664444..78999*****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTFFIEDTSL IISHVLYKTA LIITVLRWIF AWILRYRSRS SSSSSSQSSS SPSISSQTIK 60
ESLAVSAFRD AVERSPAAIN DMCAVCLGDL EDEDEIRELR NCTHVFHRDC IDRWLDYECC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATAACAGA AAATTTGACA CCGAAAGTTG TAATGAAAAA AACAATTGTA AATAAATAAA 60
TACTTTTGCA AAAATAATAA TAAAAATAGT TAAAATAAAT AAAATAAAAA GCCACTTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G43430

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006546	Arabidopsis lyrata	89.22	8.00e-61	225.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence