iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015410

Ensembl Protein ID

Bo1g081270.1

UniProt Accession

A0A0D3A9J9; A0A0D3A9J9_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g081270	Bo1g081270.1	Bo1g081270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-28	100.0	62	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++p+ f+CpIsle+M+dPv+l++G+ty+rs+I+kw++ g+ tcP+t+q+l ++ ++Pn tl++li  w +++
   Q: 62   DIPSVFICPISLEPMQDPVTLCTGQTYERSNIHKWFSLGHLTCPTTMQELWDDAVTPNRTLHHLIYTWFSQK 133
           69******************************************************************9987 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MPMFQPLKRD GLVGFEGGGD GQVLDLDTAV KDGLLGGVNG GGGVVDEKID LKTMIKELDL 60
QDIPSVFICP ISLEPMQDPV TLCTGQTYER SNIHKWFSLG HLTCPTTMQE LWDDAVTPNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATGT TTCAGCCGTT GAAGAGAGAC GGGTTAGTTG GATTCGAAGG CGGTGGCGAT 60
GGGCAAGTCT TAGATCTGGA CACGGCGGTG AAAGACGGAC TCCTCGGCGG AGTTAACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0071472--P:cellular response to salt stress
GO:1901001--P:negative regulation of response to salt stress

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	57.91	3.00e-142	498.00
IUUC-Atr-002608	Amborella trichopoda	65.92	6.00e-151	526.00
IUUC-Aly-005542	Arabidopsis lyrata	92.17	0.00e+00	744.00
IUUC-Ath-007399	Arabidopsis thaliana	93.30	0.00e+00	749.00
IUUC-Bdi-014966	Brachypodium distachyon	58.80	2.00e-146	511.00
IUUC-Bra-017594	Brassica rapa	97.09	0.00e+00	741.00
IUUC-Gma-043270	Glycine max	71.71	0.00e+00	646.00
IUUC-Hvu-047172	Hordeum vulgare	58.44	1.00e-138	486.00
IUUC-Lpe-050937	Leersia perrieri	56.26	1.00e-125	442.00
IUUC-Mtr-058060	Medicago truncatula	72.51	0.00e+00	639.00
IUUC-Mac-065223	Musa acuminata	64.63	3.00e-146	511.00
IUUC-Oba-075363	Oryza barthii	53.67	9.00e-100	356.00
IUUC-Obr-076221	Oryza brachyantha	58.35	3.00e-134	471.00
IUUC-Ogl-077601	Oryza glaberrima	58.80	3.00e-121	428.00
IUUC-Ogu-078802	Oryza glumaepatula	58.13	1.00e-129	456.00
IUUC-Oin-079670	Oryza indica	58.57	7.00e-121	427.00
IUUC-Olo-080252	Oryza longistaminata	63.00	1.00e-79	289.00
IUUC-Ome-081565	Oryza meridionalis	58.57	7.00e-121	427.00
IUUC-Oni-082638	Oryza nivara	58.57	7.00e-121	427.00
IUUC-Opu-083387	Oryza punctata	58.57	3.00e-121	428.00
IUUC-Oru-084585	Oryza rufipogon	58.57	7.00e-121	427.00
IUUC-Osa-086056	Oryza sativa	58.57	7.00e-121	427.00
IUUC-Pop-098956	Populus trichocarpa	66.96	6.00e-155	540.00
IUUC-Ppe-101617	Prunus persica	73.50	4.00e-178	617.00
IUUC-Sit-109761	Setaria italica	59.24	5.00e-135	474.00
IUUC-Sly-111041	Solanum lycopersicum	59.33	2.00e-138	485.00
IUUC-Stu-112727	Solanum tuberosum	64.44	1.00e-165	575.00
IUUC-Sbi-113971	Sorghum bicolor	59.47	3.00e-142	498.00
IUUC-Tca-121202	Theobroma cacao	76.05	0.00e+00	681.00
IUUC-Tae-123424	Triticum aestivum	58.13	4.00e-142	497.00
IUUC-Tur-126157	Triticum urartu	62.50	3.00e-60	224.00
IUUC-Vvi-131367	Vitis vinifera	75.67	0.00e+00	641.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence