iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000505

Ensembl Protein ID

EMT09640

UniProt Accession

M8B7K5; M8B7K5_AEGTA

Genbank Protein ID

EMT09640.1

Protein Name

RING-H2 finger protein ATL4M

Genbank Nucleotide ID

KD562403

Gene Name

F775_28587

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_28587	EMT09640	EMT09640

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	32.0	238	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++lp C Hvfh  C+  w        k+ +CPlCr
   Q: 238  CSVCLQDFqigEK-VRSLPdCLHVFHVPCIDGW------LIKHGSCPLCR 280
           ********88555.*******************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAPARQPLMA ARAGQVAGRR AAAMTTGVEW GVGSEAGVWW MDPSGAFARS SSNVSLASLV 60
RSGSGGSSGS SGSSRGRGGS RRMVRRVLRG VITFIFAIAG LFLGAVTGGL IGLATESGLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCCG CGCGGCAGCC ATTGATGGCC GCACGCGCAG GGCAGGTGGC AGGCAGGCGG 60
GCAGCAGCCA TGACCACGGT GGGGTGGGTC GATGGCGTTC ACGTCAGCAG AGCCTCGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_28587

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002941	Amborella trichopoda	42.94	2.00e-37	147.00
IUUC-Aly-005702	Arabidopsis lyrata	52.70	6.00e-44	169.00
IUUC-Ath-007348	Arabidopsis thaliana	53.76	1.00e-52	198.00
IUUC-Bgr-012120	Blumeria graminis	37.04	2.00e-10	59.70
IUUC-Bci-013936	Botrytis cinerea	46.97	1.00e-12	67.00
IUUC-Bdi-014992	Brachypodium distachyon	96.52	2.00e-111	393.00
IUUC-Bol-015818	Brassica oleracea	53.30	2.00e-60	224.00
IUUC-Bra-017036	Brassica rapa	53.30	2.00e-60	224.00
IUUC-Cme-027313	Cyanidioschyzon merolae	43.66	1.00e-12	66.60
IUUC-Fox-038011	Fusarium oxysporum	34.01	1.00e-14	73.90
IUUC-Fso-038141	Fusarium solani	34.69	5.00e-15	75.10
IUUC-Ggr-040021	Gaeumannomyces graminis	62.50	4.00e-13	68.90
IUUC-Gma-043095	Glycine max	56.22	6.00e-55	206.00
IUUC-Lpe-051237	Leersia perrieri	81.20	2.00e-108	384.00
IUUC-Laf-054296	Loxodonta africana	42.67	3.00e-13	69.70
IUUC-Mor-056917	Magnaporthe oryzae	60.42	3.00e-12	65.90
IUUC-Mpo-057522	Magnaporthe poae	61.11	1.00e-13	70.50
IUUC-Mtr-058160	Medicago truncatula	53.73	5.00e-54	202.00
IUUC-Mac-064778	Musa acuminata	59.20	2.00e-66	244.00
IUUC-Ncr-068696	Neurospora crassa	54.17	1.00e-11	63.90
IUUC-Oba-075390	Oryza barthii	83.40	1.00e-110	391.00
IUUC-Obr-076264	Oryza brachyantha	83.40	8.00e-111	392.00
IUUC-Ogl-077598	Oryza glaberrima	83.40	1.00e-110	391.00
IUUC-Ogu-078526	Oryza glumaepatula	83.40	1.00e-110	391.00
IUUC-Oin-079706	Oryza indica	83.40	1.00e-110	391.00
IUUC-Olo-080832	Oryza longistaminata	83.40	1.00e-110	391.00
IUUC-Ome-081142	Oryza meridionalis	83.40	1.00e-110	391.00
IUUC-Oni-082117	Oryza nivara	83.40	1.00e-110	391.00
IUUC-Opu-083964	Oryza punctata	83.40	5.00e-111	392.00
IUUC-Oru-084552	Oryza rufipogon	83.40	1.00e-110	391.00
IUUC-Osa-085950	Oryza sativa	83.40	1.00e-110	391.00
IUUC-Pop-099844	Populus trichocarpa	52.74	7.00e-62	229.00
IUUC-Ppe-101906	Prunus persica	55.56	2.00e-63	234.00
IUUC-Sit-110653	Setaria italica	92.89	3.00e-105	373.00
IUUC-Stu-112026	Solanum tuberosum	41.46	9.00e-26	108.00
IUUC-Sbi-114811	Sorghum bicolor	93.91	3.00e-106	376.00
IUUC-Tca-121142	Theobroma cacao	52.24	4.00e-61	226.00
IUUC-Tae-125745	Triticum aestivum	100.00	2.00e-114	403.00
IUUC-Tur-126195	Triticum urartu	84.38	1.00e-88	318.00
IUUC-Vda-129899	Verticillium dahliae	49.09	3.00e-12	65.50
IUUC-Vvi-131089	Vitis vinifera	55.56	6.00e-63	233.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence