iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099472

UUCD1 version

UUC-PoT-00930

Ensembl Protein ID

POPTR_0005s10190.1

UniProt Accession

A9P9N9; A9P9N9_POPTR

Genbank Protein ID

ABK93092.1; EEE94196.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EF144886; CM000341

Gene Name

POPTRDRAFT_818355; POPTR_0005s10190g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s10190	POPTR_0005s10190.1	POPTR_0005s10190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-10	41.5	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+++vlp CgH fh  C+ kw         + +CP Cr
   Q: 101  CAICLGEFveGDEVRVLPqCGHGFHVGCIDKW------LGSHSSCPSCR 143
           ********88555*******************......99********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPRFTRILNT KAAEPPAAVN LESDFVVILA ALLCALICVV GLIAAARCAW LRRVTGGASS 60
GPPPQAKANK GVKKKNLQLL PRFTYSAGGG GATTSFGTTE CAICLGEFVE GDEVRVLPQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACCCCAA CCCACCCCTC TTTTTGTTTA TAAAAACAAG AACCTCCTCC AAGAATTCAA 60
TTCTTGATAT CTCCATTTAC TTCATCAACA TTCCAACAAC TCAACATCCC GATCCTTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s10190g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000545	Aegilops tauschii	48.51	2.00e-19	87.80
IUUC-Gma-043769	Glycine max	64.55	7.00e-44	169.00
IUUC-Lpe-051468	Leersia perrieri	43.80	9.00e-22	95.90
IUUC-Mtr-057800	Medicago truncatula	67.08	3.00e-46	177.00
IUUC-Ppe-101319	Prunus persica	59.69	3.00e-55	207.00
IUUC-Sit-110757	Setaria italica	53.68	3.00e-26	110.00
IUUC-Sly-111159	Solanum lycopersicum	70.92	8.00e-43	166.00
IUUC-Sbi-114504	Sorghum bicolor	62.69	2.00e-21	94.70
IUUC-Tca-121004	Theobroma cacao	60.40	8.00e-40	155.00
IUUC-Ttr-128337	Tursiops truncatus	42.65	4.00e-12	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence