iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120990

Ensembl Protein ID

EOY00378

UniProt Accession

A0A061E6V5; A0A061E6V5_THECC

Genbank Protein ID

EOY00378.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001880

Gene Name

TCM_010246

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_010246	EOY00378	EOY00378

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.50e-30	103.6	280	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +++CpIsle+M+dPv+l++G+tydr sI kw++sg+ tcP+t+++lt+++lvPnl+l+ +iq++c+en++
   Q: 280  DLKCPISLEIMSDPVTLSTGHTYDRCSILKWFSSGNATCPKTGEKLTSTELVPNLVLKGVIQRYCAENGV 349
           689****************************************************************975 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MIQKLNGSCR RILAYPAVHP CQSISPLTLL NSLIDLGRDI CSYKSKFLST NKRNARETFR 60
QITNLLLILE EIRNATSDPP DPVILRLPEL HLTFQKFRYL LEDCTCDGSR AWMLVNSDRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTCGCCAT TTCGCAATAA ATGAACATTT GTAAATATCT GTATACTTAC TAAAACTGAA 60
TTATTAGCTT CATAATAATA TCAATTATTA TCAATAAATT AAAATTCTAA CTTTTTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006201	Arabidopsis lyrata	49.86	0.00e+00	635.00
IUUC-Ath-006754	Arabidopsis thaliana	50.57	8.00e-180	622.00
IUUC-Bol-015964	Brassica oleracea	50.07	1.00e-178	619.00
IUUC-Bra-017789	Brassica rapa	51.15	4.00e-179	620.00
IUUC-Gma-043325	Glycine max	55.27	0.00e+00	655.00
IUUC-Mtr-058256	Medicago truncatula	56.17	0.00e+00	687.00
IUUC-Sly-111130	Solanum lycopersicum	52.99	0.00e+00	709.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence