iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016473

Ensembl Protein ID

Bo1g039110.1

UniProt Accession

A0A0D3A603; A0A0D3A603_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g039110	Bo1g039110.1	Bo1g039110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.10e-76	258.8	546	851

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +Gl N gN+C+ N v QcL+++p+l+ ++l+ +++++++     ++++++++ +++l+ e  ++ k++ sp+ ll+ l+++  ++ + +q+Da+Efl
   Q: 546  CGLINSGNSCFANVVFQCLMFTPPLTTYFLQrHHSRACP-----NKEQCFTCGFENLVLEA-TEGKSSLSPSGLLSRLQNIGISLGNGKQEDAHEFL 636
           7******************************44444444.....5689**********999.788889***************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLes 193
           +f++d++++ + k               +++ ++++  k + ++li  +F+g l+s+ikc +c+++s+r+e+++dl++++ g+ +    +l+d+L+ 
   Q: 637  RFVVDTMQTLCIK---------------ASEYDEPKTRKLEDTTLIGLTFGGYLRSKIKCMKCQEKSERREKMMDLTVEIDGDIS----TLEDALRR 714
           ***********22...............222335677888899*****************************************6....7******* PP
   S: 194  ftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.. 288
           ft++e l+genky+c +ck++ +a+kklk+ + P+vL++ LkRf   ++ ++  k+nk v fp++Ldl+p++++ +ek   ++ Y+L++v+vH    
   Q: 715  FTRTEILDGENKYKCGRCKSYERAKKKLKIIEPPNVLTIALKRF---QS-GKFGKLNKLVRFPETLDLAPYVSRGSEK---SHDYKLYGVIVHLDvm 804
           ********************************************...33.4557********************5544...8***********8733 PP
   S: 289  .slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             + sGHYv+y++n+++kW++ dD++V +++ e+vl+   + aY+lfY r
   Q: 805  nAAFSGHYVCYIRNSQNKWYKADDNTVVTSDVERVLT---KGAYMLFYAR 851
           25569********************************...********87 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MLLVLDLGLS SLVLVISLLA IPLIGFVVRR QWRLAALRRE EIRRLLIHAS EEAARVEREA 60
SVEFSFAPVA NSFYCPVCYC PALTRCSRCK AVRYCSGKCQ IIHWRQGHKD ECQPASITYN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCCTCG TCTTGGATCT AGGGCTTTCT AGTCTAGTCC TTGTGATCTC TCTGCTAGCT 60
ATACCTCTGA TTGGCTTCGT CGTTCGCCGC CAATGGAGGC TCGCGGCTCT GAGAAGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-018079	Brassica rapa	94.21	0.00e+00	1668.00
IUUC-Gma-043347	Glycine max	43.90	1.00e-169	590.00
IUUC-Mtr-058024	Medicago truncatula	42.28	2.00e-151	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence