iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002957

Ensembl Protein ID

ERN09788

UniProt Accession

W1PP05; W1PP05_AMBTC

Genbank Protein ID

ERN09788.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392980

Gene Name

AMTR_s00029p00242040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00029p00242040	ERN09788	ERN09788

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-18	65.2	339	369

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+  v++  f   ++t +++ s D+ i+vWD
   Q: 339  HSRVVNSAYFsplTGTKILTTSQDNRIRVWD 369
           9999***999*9666**************** PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MNRRSRRVLF PRVAIEVESE TEESSEDEEE DHEEEPLTPP TQPVNNKKKA PITISLKRVC 60
KVCKGTGHEA GFKGATYIDC PKKPCFLCKQ PGHTTMNCPH RVATEHGVVP AHRREFRGSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCGGC GAAGCAGGAG AGTACTGTTC CCCAGAGTTG CAATCGAGGT AGAGTCGGAA 60
ACAGAGGAGA GCTCTGAAGA TGAAGAAGAA GACCATGAAG AAGAACCGTT AACCCCACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50158--ZF_CCHC

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

atr:18437948

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	67.80	0.00e+00	666.00
IUUC-Aml-002203	Ailuropoda melanoleuca	29.88	6.00e-35	140.00
IUUC-Apl-003832	Anas platyrhynchos	33.73	1.00e-39	156.00
IUUC-Aca-004358	Anolis carolinensis	34.12	2.00e-40	159.00
IUUC-Aly-006296	Arabidopsis lyrata	71.76	0.00e+00	661.00
IUUC-Ath-007115	Arabidopsis thaliana	69.56	0.00e+00	661.00
IUUC-Ame-010817	Astyanax mexicanus	32.46	8.00e-41	160.00
IUUC-Bta-012914	Bos taurus	31.00	1.00e-37	149.00
IUUC-Bdi-014261	Brachypodium distachyon	67.76	0.00e+00	682.00
IUUC-Bol-015317	Brassica oleracea	69.33	0.00e+00	661.00
IUUC-Bra-016848	Brassica rapa	69.33	0.00e+00	658.00
IUUC-Cja-018967	Callithrix jacchus	29.18	2.00e-34	138.00
IUUC-Cfa-021238	Canis familiaris	30.49	1.00e-32	132.00
IUUC-Cpo-022063	Cavia porcellus	30.63	9.00e-35	139.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.48	1.00e-34	139.00
IUUC-Cho-024805	Choloepus hoffmanni	24.32	1.00e-08	52.80
IUUC-Cin-025651	Ciona intestinalis	25.43	2.00e-19	89.70
IUUC-Cne-027093	Cryptococcus neoformans	25.00	2.00e-11	63.20
IUUC-Dre-028732	Danio rerio	32.83	7.00e-37	147.00
IUUC-Dor-030461	Dipodomys ordii	31.72	2.00e-26	111.00
IUUC-Dse-031299	Dothistroma septosporum	22.22	5.00e-18	84.70
IUUC-Ete-033038	Echinops telfairi	30.54	5.00e-36	144.00
IUUC-Eca-033772	Equus caballus	30.09	3.00e-35	141.00
IUUC-Fca-036095	Felis catus	29.12	8.00e-32	130.00
IUUC-Fal-036986	Ficedula albicollis	26.65	4.00e-20	91.70
IUUC-Gmo-039683	Gadus morhua	33.04	4.00e-45	174.00
IUUC-Gga-040530	Gallus gallus	33.73	9.00e-41	160.00
IUUC-Gac-041517	Gasterosteus aculeatus	32.45	1.00e-35	142.00
IUUC-Gma-043378	Glycine max	73.52	0.00e+00	735.00
IUUC-Ggo-045364	Gorilla gorilla	30.09	1.00e-35	142.00
IUUC-Hsa-046354	Homo sapiens	30.09	1.00e-35	142.00
IUUC-Hvu-047151	Hordeum vulgare	71.99	7.00e-128	448.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	31.21	8.00e-36	143.00
IUUC-Lpe-051256	Leersia perrieri	64.29	0.00e+00	649.00
IUUC-Loc-052398	Lepisosteus oculatus	33.23	2.00e-41	162.00
IUUC-Laf-053562	Loxodonta africana	31.40	2.00e-37	148.00
IUUC-Mcc-055197	Macaca mulatta	28.85	3.00e-29	121.00
IUUC-Meu-056151	Macropus eugenii	32.51	1.00e-33	135.00
IUUC-Mtr-057940	Medicago truncatula	72.48	0.00e+00	731.00
IUUC-Mla-058906	Melampsora laricipopulina	20.57	9.00e-14	70.50
IUUC-Mga-059923	Meleagris gallopavo	34.91	4.00e-43	167.00
IUUC-Mvi-060555	Microbotryum violaceum	22.91	2.00e-13	69.70
IUUC-Mmr-061465	Microcebus murinus	29.79	2.00e-29	122.00
IUUC-Mdo-063063	Monodelphis domestica	33.03	3.00e-41	161.00
IUUC-Mmu-064294	Mus musculus	31.47	5.00e-36	144.00
IUUC-Mac-065598	Musa acuminata	70.90	0.00e+00	703.00
IUUC-Mpu-066831	Mustela putorius furo	29.48	4.00e-31	127.00
IUUC-Mlu-067222	Myotis lucifugus	31.38	2.00e-35	142.00
IUUC-Nle-069581	Nomascus leucogenys	30.33	5.00e-36	144.00
IUUC-Opr-070644	Ochotona princeps	30.61	4.00e-36	144.00
IUUC-Ont-072605	Oreochromis niloticus	32.72	3.00e-38	151.00
IUUC-Oan-072973	Ornithorhynchus anatinus	33.53	3.00e-41	161.00
IUUC-Ocu-074615	Oryctolagus cuniculus	29.70	1.00e-35	143.00
IUUC-Oba-075283	Oryza barthii	63.67	0.00e+00	632.00
IUUC-Obr-076605	Oryza brachyantha	67.46	0.00e+00	681.00
IUUC-Ogl-077512	Oryza glaberrima	64.63	0.00e+00	647.00
IUUC-Ogu-078329	Oryza glumaepatula	63.88	0.00e+00	632.00
IUUC-Oin-079980	Oryza indica	63.88	0.00e+00	632.00
IUUC-Olo-080516	Oryza longistaminata	68.07	4.00e-177	613.00
IUUC-Ome-081415	Oryza meridionalis	64.92	0.00e+00	644.00
IUUC-Oni-082985	Oryza nivara	63.88	0.00e+00	632.00
IUUC-Opu-084159	Oryza punctata	69.98	0.00e+00	671.00
IUUC-Oru-085137	Oryza rufipogon	64.90	0.00e+00	650.00
IUUC-Osa-085614	Oryza sativa	64.90	0.00e+00	650.00
IUUC-Ola-087044	Oryzias latipes	32.40	9.00e-40	156.00
IUUC-Oga-088274	Otolemur garnettii	30.54	1.00e-35	142.00
IUUC-Oar-089826	Ovis aries	31.00	2.00e-37	148.00
IUUC-Ptr-091631	Pan troglodytes	30.09	1.00e-35	142.00
IUUC-Pan-092535	Papio anubis	29.48	2.00e-35	142.00
IUUC-Psi-093815	Pelodiscus sinensis	33.14	6.00e-38	150.00
IUUC-Pma-094474	Petromyzon marinus	31.07	4.00e-36	144.00
IUUC-Ppa-095414	Physcomitrella patens	63.05	1.00e-175	608.00
IUUC-Pfo-096559	Poecilia formosa	33.33	8.00e-39	153.00
IUUC-Pab-098528	Pongo abelii	30.09	1.00e-35	142.00
IUUC-Pop-100064	Populus trichocarpa	73.04	0.00e+00	728.00
IUUC-Pca-100803	Procavia capensis	30.18	4.00e-36	144.00
IUUC-Ppe-101966	Prunus persica	74.67	0.00e+00	733.00
IUUC-Pva-103213	Pteropus vampyrus	30.40	4.00e-36	144.00
IUUC-Pgr-103436	Puccinia graminis	22.44	2.00e-09	56.20
IUUC-Ptt-103899	Puccinia triticina	22.67	3.00e-12	65.50
IUUC-Rno-105087	Rattus norvegicus	32.22	4.00e-37	147.00
IUUC-Sha-107466	Sarcophilus harrisii	34.72	1.00e-43	169.00
IUUC-Smo-108958	Selaginella moellendorffii	60.72	1.00e-171	595.00
IUUC-Sit-109968	Setaria italica	68.47	0.00e+00	636.00
IUUC-Sly-111495	Solanum lycopersicum	65.65	0.00e+00	677.00
IUUC-Sar-113272	Sorex araneus	29.48	3.00e-33	134.00
IUUC-Sbi-114706	Sorghum bicolor	62.78	2.00e-170	590.00
IUUC-Ssc-115437	Sus scrofa	30.40	1.00e-32	133.00
IUUC-Tgu-116602	Taeniopygia guttata	32.84	2.00e-38	151.00
IUUC-Tru-118698	Takifugu rubripes	31.96	1.00e-33	136.00
IUUC-Tsy-119027	Tarsius syrichta	31.82	5.00e-29	120.00
IUUC-Tni-119787	Tetraodon nigroviridis	33.02	4.00e-41	161.00
IUUC-Tca-121447	Theobroma cacao	76.47	0.00e+00	729.00
IUUC-Tae-125839	Triticum aestivum	68.89	0.00e+00	684.00
IUUC-Tur-126724	Triticum urartu	70.23	0.00e+00	684.00
IUUC-Tbe-127680	Tupaia belangeri	28.92	2.00e-26	112.00
IUUC-Ttr-128201	Tursiops truncatus	25.00	9.00e-19	87.00
IUUC-Vvi-131001	Vitis vinifera	74.89	0.00e+00	742.00
IUUC-Xtr-132266	Xenopus tropicalis	33.33	1.00e-44	172.00
IUUC-Xma-133034	Xiphophorus maculatus	33.64	6.00e-37	147.00
IUUC-Zma-135674	Zea mays	63.45	1.00e-173	601.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence