iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130986

UUCD1 version

UUC-ViV-00991

Ensembl Protein ID

VIT_15s0046g01400.t01

UniProt Accession

A5BM41; A5BM41_VITVI

Genbank Protein ID

CAN77754.1; CAN81281.1; CBI32888.3; CBI40471.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM487884; AM464235; FN596008; FN596755

Gene Name

VIT_08s0040g00040; VIT_15s0046g01400; VITISV_016558; VITISV_039341

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_15s0046g01400	VIT_15s0046g01400.t01	VIT_15s0046g01400.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	8.60e-57	191.4	5	139
UBD/UBC-like/UBD_UBC	3.80e-75	251.1	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilke 88
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk 
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK- 90
           899*********************.9************************************************************9. PP
   S: 89   eekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
            e+Wspal++++vllsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 91   -EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 139
           .*********************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsq 88
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++q
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
           899************************************************************************************* PP
   S: 89   wsaaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           ws+alt+skvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWT 142
           *************************************************8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGGGTTTCG GCATGGCCTC GAAGCGGATC TTGAAGGAGC TCAAGGATCT CCAGAAAGAT 60
CCTCCGACAT CTTGCAGTGC TGGTATACTT TTGTTTTATT TTATGTAAAA GACCTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

vvi:100232965; vvi:100249853

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006364	Arabidopsis lyrata	97.30	2.00e-84	303.00
IUUC-Bol-016243	Brassica oleracea	97.30	7.00e-84	301.00
IUUC-Bra-016748	Brassica rapa	95.27	4.00e-84	305.00
IUUC-Cel-018362	Caenorhabditis elegans	79.59	3.00e-70	256.00
IUUC-Gac-042516	Gasterosteus aculeatus	80.95	4.00e-70	255.00
IUUC-Lpe-050972	Leersia perrieri	96.62	6.00e-84	301.00
IUUC-Mtr-058532	Medicago truncatula	97.30	5.00e-84	301.00
IUUC-Mac-065211	Musa acuminata	99.32	6.00e-86	308.00
IUUC-Obr-076658	Oryza brachyantha	96.62	6.00e-84	301.00
IUUC-Ogl-077124	Oryza glaberrima	97.30	3.00e-84	302.00
IUUC-Oin-080092	Oryza indica	97.30	3.00e-84	302.00
IUUC-Olo-080786	Oryza longistaminata	95.27	4.00e-83	298.00
IUUC-Opu-083833	Oryza punctata	97.30	3.00e-84	302.00
IUUC-Osa-086291	Oryza sativa	96.62	1.00e-83	300.00
IUUC-Ppa-095564	Physcomitrella patens	98.65	5.00e-85	305.00
IUUC-Pfo-096472	Poecilia formosa	80.95	3.00e-70	255.00
IUUC-Ppe-101704	Prunus persica	100.00	5.00e-86	308.00
IUUC-Sha-106489	Sarcophilus harrisii	77.14	2.00e-66	243.00
IUUC-Smo-109317	Selaginella moellendorffii	98.65	4.00e-85	305.00
IUUC-Sly-111055	Solanum lycopersicum	98.65	3.00e-85	305.00
IUUC-Stu-112825	Solanum tuberosum	98.65	6.00e-85	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence