iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108901

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377590

Gene Name

SELMODRAFT_102307

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_102307	EFJ24191	EFJ24191

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-27	95.4	114	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+ v+++++ +  +l+vs+++D ++++WD+ +g 
   Q: 114  GHTETVRAVRLvPArNLVVSAGYDSSVRIWDVGDGL 149
           8**********97679***************98875 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEERHGARPQ HQVSSSSGGS YAHPPECRII DLPPVVILEI FRHLDPRELS VVACVCPLFR 60
ILASDSHGWK EYYCERWGLP GAVAPAHEWK QLYVARETRC KALLGRFKLD LLCGHTETVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGA GGCATGGCGC ACGGCCGCAG CACCAGGTGA GTAGTAGCTC CGGGGGATCC 60
TACGCGCATC CGCCGGAATG CCGCATCATC GACCTCCCCC CGGTGGTAAT CCTCGAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00256--FBOX
SM00320--WD40

KEGG

smo:SELMODRAFT_102307

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	42.83	7.00e-105	374.00
IUUC-Atr-002870	Amborella trichopoda	44.55	2.00e-94	338.00
IUUC-Aly-005424	Arabidopsis lyrata	42.96	2.00e-96	345.00
IUUC-Ath-007005	Arabidopsis thaliana	44.19	3.00e-98	351.00
IUUC-Bdi-014622	Brachypodium distachyon	43.58	1.00e-102	366.00
IUUC-Bol-016449	Brassica oleracea	42.33	5.00e-93	333.00
IUUC-Gma-044132	Glycine max	44.89	2.00e-96	345.00
IUUC-Hvu-047789	Hordeum vulgare	43.83	6.00e-106	377.00
IUUC-Lpe-051245	Leersia perrieri	41.91	6.00e-100	357.00
IUUC-Mtr-058000	Medicago truncatula	45.25	1.00e-100	359.00
IUUC-Mac-065354	Musa acuminata	42.80	1.00e-97	349.00
IUUC-Oba-074979	Oryza barthii	41.39	1.00e-100	359.00
IUUC-Obr-076615	Oryza brachyantha	42.00	1.00e-99	355.00
IUUC-Ogl-077075	Oryza glaberrima	41.39	6.00e-101	360.00
IUUC-Ogu-078476	Oryza glumaepatula	41.39	2.00e-101	362.00
IUUC-Oin-079267	Oryza indica	41.60	8.00e-102	363.00
IUUC-Olo-080272	Oryza longistaminata	41.42	6.00e-102	363.00
IUUC-Ome-081994	Oryza meridionalis	41.60	9.00e-102	363.00
IUUC-Oni-082607	Oryza nivara	41.60	8.00e-102	363.00
IUUC-Opu-083533	Oryza punctata	41.89	5.00e-102	364.00
IUUC-Oru-084485	Oryza rufipogon	41.60	2.00e-101	362.00
IUUC-Osa-085675	Oryza sativa	41.60	9.00e-102	363.00
IUUC-Ppa-095179	Physcomitrella patens	51.24	6.00e-126	443.00
IUUC-Pop-099631	Populus trichocarpa	44.42	1.00e-95	342.00
IUUC-Ppe-102090	Prunus persica	43.08	5.00e-97	347.00
IUUC-Sit-110702	Setaria italica	42.98	9.00e-101	360.00
IUUC-Stu-112399	Solanum tuberosum	44.90	4.00e-98	351.00
IUUC-Sbi-114384	Sorghum bicolor	43.11	4.00e-95	341.00
IUUC-Tca-121388	Theobroma cacao	47.47	4.00e-104	370.00
IUUC-Tae-123207	Triticum aestivum	43.03	2.00e-105	375.00
IUUC-Tur-126520	Triticum urartu	43.44	1.00e-105	376.00
IUUC-Vvi-131268	Vitis vinifera	47.60	4.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence