iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007434

UUCD1 version

UUC-ArT-00878

Ensembl Protein ID

AT5G63010.1

UniProt Accession

Q9FM51; Q9FM51_ARATH

Genbank Protein ID

AED97686.1; BAB08844.1

Protein Name

Putative uncharacterized protein; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CP002688; AB009051

Gene Name

MJH22.7; MJH22_7; At5g63010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G63010	AT5G63010.1	AT5G63010.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-11	43.8	209	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           Ht +v+c++   sd   + +Gs+D t++vWD+r+
   Q: 209  HTMGVCCISSnpSDpYSIFTGSYDETLRVWDTRS 242
           77789999889888677**************875 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDAADCYLEG NADAVEFCPH ESYANLLAAS TYTLQEGDCP SRSGSVYLFD VGDVEDVGLN 60
LIQKIDTAGV FDIRWSRGGD GGDVALAQAD ADGCLIVYKI DETESKGTLR EVSGKRISSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTAAAACG CTTTATTTTA GCCGCCGGGG AAAAAATTGG TGACAAGAGC AGAGAGAGTC 60
GCCATGGACG CAGCAGATTG CTATCTCGAA GGAAACGCCG ACGCCGTAGA ATTCTGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

KEGG

ath:AT5G63010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000566	Aegilops tauschii	56.42	4.00e-75	273.00
IUUC-Aml-001799	Ailuropoda melanoleuca	34.43	3.00e-41	162.00
IUUC-Atr-002540	Amborella trichopoda	55.00	5.00e-74	269.00
IUUC-Apl-003582	Anas platyrhynchos	35.31	7.00e-42	164.00
IUUC-Aca-004275	Anolis carolinensis	39.67	2.00e-39	155.00
IUUC-Aly-005425	Arabidopsis lyrata	93.82	0.00e+00	648.00
IUUC-Ago-007782	Ashbya gossypii	35.15	1.00e-23	103.00
IUUC-Ang-009512	Aspergillus niger	28.14	2.00e-07	49.70
IUUC-Ame-011276	Astyanax mexicanus	44.51	7.00e-37	146.00
IUUC-Bta-012985	Bos taurus	33.13	6.00e-41	160.00
IUUC-Bdi-014568	Brachypodium distachyon	52.01	1.00e-91	329.00
IUUC-Bol-016236	Brassica oleracea	83.78	6.00e-169	585.00
IUUC-Bra-017012	Brassica rapa	82.60	5.00e-161	559.00
IUUC-Cel-018435	Caenorhabditis elegans	27.18	2.00e-13	69.30
IUUC-Cja-018952	Callithrix jacchus	34.82	4.00e-43	168.00
IUUC-Cfa-021210	Canis familiaris	34.86	1.00e-41	163.00
IUUC-Cpo-022017	Cavia porcellus	36.20	1.00e-43	169.00
IUUC-Cre-022584	Chlamydomonas reinhardtii	43.80	1.00e-31	128.00
IUUC-Csa-023897	Chlorocebus sabaeus	36.49	9.00e-43	166.00
IUUC-Cho-024708	Choloepus hoffmanni	46.46	3.00e-21	94.70
IUUC-Cin-025485	Ciona intestinalis	33.43	1.00e-50	192.00
IUUC-Cne-026845	Cryptococcus neoformans	33.80	2.00e-48	185.00
IUUC-Cme-027194	Cyanidioschyzon merolae	29.03	3.00e-21	94.70
IUUC-Dre-028581	Danio rerio	39.45	9.00e-50	190.00
IUUC-Dno-029285	Dasypus novemcinctus	35.89	2.00e-45	176.00
IUUC-Dor-030566	Dipodomys ordii	34.10	2.00e-44	172.00
IUUC-Dme-031714	Drosophila melanogaster	34.48	2.00e-45	175.00
IUUC-Ete-032317	Echinops telfairi	29.45	5.00e-34	137.00
IUUC-Eca-033341	Equus caballus	44.36	7.00e-23	98.60
IUUC-Eeu-034890	Erinaceus europaeus	31.63	7.00e-41	160.00
IUUC-Fca-035966	Felis catus	34.73	1.00e-43	169.00
IUUC-Fal-037338	Ficedula albicollis	34.94	1.00e-45	176.00
IUUC-Gmo-039487	Gadus morhua	38.94	1.00e-51	196.00
IUUC-Gga-040691	Gallus gallus	34.76	8.00e-45	174.00
IUUC-Gac-041912	Gasterosteus aculeatus	39.17	2.00e-51	195.00
IUUC-Gma-043166	Glycine max	60.52	9.00e-121	425.00
IUUC-Ggo-045003	Gorilla gorilla	34.53	6.00e-46	177.00
IUUC-Hsa-046840	Homo sapiens	34.83	3.00e-47	181.00
IUUC-Hvu-047291	Hordeum vulgare	52.29	1.00e-100	358.00
IUUC-Itr-048072	Ictidomys tridecemlineatus	34.74	2.00e-40	159.00
IUUC-Kpa-049296	Komagataella pastoris	27.81	3.00e-24	105.00
IUUC-Lch-049627	Latimeria chalumnae	38.37	5.00e-53	201.00
IUUC-Lpe-051462	Leersia perrieri	54.73	3.00e-97	347.00
IUUC-Loc-052917	Lepisosteus oculatus	38.46	6.00e-51	194.00
IUUC-Laf-054268	Loxodonta africana	32.21	1.00e-43	170.00
IUUC-Mcc-055309	Macaca mulatta	35.14	2.00e-47	182.00
IUUC-Meu-055985	Macropus eugenii	36.70	4.00e-47	181.00
IUUC-Mtr-058767	Medicago truncatula	59.65	3.00e-123	434.00
IUUC-Mla-059032	Melampsora laricipopulina	31.72	2.00e-41	162.00
IUUC-Mga-059799	Meleagris gallopavo	38.16	8.00e-34	137.00
IUUC-Mvi-060258	Microbotryum violaceum	34.91	3.00e-39	155.00
IUUC-Mmr-061425	Microcebus murinus	33.73	6.00e-44	171.00
IUUC-Mdo-062620	Monodelphis domestica	37.69	2.00e-52	199.00
IUUC-Mmu-063473	Mus musculus	35.78	1.00e-46	179.00
IUUC-Mac-065376	Musa acuminata	55.10	3.00e-113	400.00
IUUC-Mpu-066124	Mustela putorius furo	34.04	1.00e-43	170.00
IUUC-Mlu-067844	Myotis lucifugus	35.78	1.00e-45	176.00
IUUC-Ont-071523	Oreochromis niloticus	39.34	4.00e-57	214.00
IUUC-Oan-072754	Ornithorhynchus anatinus	31.88	3.00e-30	125.00
IUUC-Ocu-074659	Oryctolagus cuniculus	40.59	2.00e-30	125.00
IUUC-Oba-075786	Oryza barthii	59.63	2.00e-69	254.00
IUUC-Obr-076077	Oryza brachyantha	53.98	3.00e-95	341.00
IUUC-Ogl-077449	Oryza glaberrima	54.62	3.00e-97	347.00
IUUC-Ogu-078217	Oryza glumaepatula	54.62	5.00e-97	347.00
IUUC-Oin-079292	Oryza indica	54.62	3.00e-97	347.00
IUUC-Olo-080599	Oryza longistaminata	59.05	4.00e-73	266.00
IUUC-Ome-081740	Oryza meridionalis	52.66	9.00e-95	339.00
IUUC-Oni-082582	Oryza nivara	54.62	3.00e-97	347.00
IUUC-Opu-083166	Oryza punctata	53.01	6.00e-94	336.00
IUUC-Oru-084514	Oryza rufipogon	53.07	1.00e-86	313.00
IUUC-Osa-086226	Oryza sativa	54.62	3.00e-97	347.00
IUUC-Olu-087798	Ostreococcus lucimarinus	40.55	3.00e-36	144.00
IUUC-Oga-088820	Otolemur garnettii	33.53	2.00e-42	166.00
IUUC-Oar-089825	Ovis aries	31.20	1.00e-32	133.00
IUUC-Pan-091766	Papio anubis	34.63	2.00e-39	155.00
IUUC-Psi-093167	Pelodiscus sinensis	35.54	2.00e-49	189.00
IUUC-Pno-095089	Phaeosphaeria nodorum	25.98	5.00e-20	91.30
IUUC-Ppa-095299	Physcomitrella patens	46.52	4.00e-85	307.00
IUUC-Pfo-096456	Poecilia formosa	38.82	3.00e-55	208.00
IUUC-Pab-097864	Pongo abelii	43.79	2.00e-33	135.00
IUUC-Pop-100043	Populus trichocarpa	63.96	3.00e-98	350.00
IUUC-Ppe-101556	Prunus persica	62.28	8.00e-127	446.00
IUUC-Pva-102281	Pteropus vampyrus	35.08	2.00e-42	165.00
IUUC-Pgr-103459	Puccinia graminis	33.33	8.00e-29	120.00
IUUC-Rno-105659	Rattus norvegicus	36.09	2.00e-45	176.00
IUUC-Sha-107077	Sarcophilus harrisii	36.04	6.00e-46	177.00
IUUC-Smo-108959	Selaginella moellendorffii	45.61	6.00e-79	286.00
IUUC-Sit-109789	Setaria italica	49.41	1.00e-82	299.00
IUUC-Sly-110953	Solanum lycopersicum	64.25	7.00e-92	329.00
IUUC-Stu-112698	Solanum tuberosum	63.13	5.00e-129	452.00
IUUC-Sbi-114197	Sorghum bicolor	52.91	3.00e-95	341.00
IUUC-Sre-115167	Sporisorium reilianum	36.65	5.00e-30	124.00
IUUC-Tgu-116657	Taeniopygia guttata	38.46	2.00e-33	134.00
IUUC-Tru-118578	Takifugu rubripes	35.21	2.00e-52	199.00
IUUC-Tca-121611	Theobroma cacao	64.47	8.00e-130	455.00
IUUC-Tae-123970	Triticum aestivum	50.57	4.00e-98	350.00
IUUC-Tur-126298	Triticum urartu	55.50	6.00e-74	269.00
IUUC-Ttr-128302	Tursiops truncatus	31.79	3.00e-33	134.00
IUUC-Uma-129644	Ustilago maydis	34.32	2.00e-33	136.00
IUUC-Vvi-131363	Vitis vinifera	62.68	3.00e-117	414.00
IUUC-Xtr-132976	Xenopus tropicalis	32.93	1.00e-44	173.00
IUUC-Xma-133286	Xiphophorus maculatus	38.51	1.00e-54	206.00
IUUC-Yli-134664	Yarrowia lipolytica	31.14	2.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence