iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_3B_TGACv1_222600_AA0767530	TRIAE_CS42_3B_TGACv1_222600_AA0767530.1	TRIAE_CS42_3B_TGACv1_222600_AA0767530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-16	62.6	190	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af..sd..tllvsGsdDgtikvWDlr 31
           gH+++vt+l  ++  ++  ++l++G+ D+ti++W++ 
   Q: 190  GHSGPVTALadKLldDGecKILATGGEDCTIRLWSMN 226
           8*******96556862256889************975 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MSTPLPGRTL VDLNGDALAH CARHLGARDV ASLAMACRPL RAAAYCDAVW YHLYRGQWPF 60
QQVSREALGI RELYIRRHTE VHQMKFDDPL SSIYYLDPTE LTPSHLMLDR NGVWFSQGPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGACGTGTA TACGTTCATA CGGTTGAGTG TATGCACGTG TATATAAGCG CAAGCGCTTG 60
TGTCTGTACG GTGTTAAAAA AAAGATACAG TTGGGGGCAA ACAGAGAGGT AAATTATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-057899	Medicago truncatula	47.61	1.00e-71	264.00
IUUC-Mac-065373	Musa acuminata	52.01	1.00e-102	367.00
IUUC-Oba-075705	Oryza barthii	75.37	0.00e+00	702.00
IUUC-Ogl-077871	Oryza glaberrima	75.57	0.00e+00	704.00
IUUC-Olo-080246	Oryza longistaminata	72.93	1.00e-156	546.00
IUUC-Osa-085335	Oryza sativa	75.39	1.00e-158	553.00
IUUC-Smo-108689	Selaginella moellendorffii	36.25	5.00e-55	209.00
IUUC-Tca-120973	Theobroma cacao	44.61	4.00e-112	399.00
IUUC-Vvi-131356	Vitis vinifera	45.98	2.00e-112	400.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence