iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121602

Ensembl Protein ID

EOY30726

UniProt Accession

A0A061GMJ1; A0A061GMJ1_THECC

Genbank Protein ID

EOY30726.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037837

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037837	EOY30725	EOY30725
TCM_037837	EOY30726	EOY30726

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-15	58.4	196	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllaskksllr 78
           vkvs++g+++++++dl+ +g++++L +a+++ +                           l +se+ l+YeD+dGD++ l++D++++++ +      s++r
   Q: 196  VKVSMDGAPYLRKVDLKFYGSYKELSSALEKmFScftigqcgshgvpsrdglsesrlidLLHGSEYVLTYEDKDGDWM-LVGDVPWEMFTD------SCKR 289
           9******************************722566999******************99999***************.************......**** PP
   S: 79   lliqk 83
           l+i+k
   Q: 290  LRIMK 294
           ***97 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSKPIEHDYI GLSEQQLPSM EKSSDAGNKK NGLHLKATEL RLGLPGSESP EREDHDHKLL 60
SLKSFVSGAK RGFSDTLNGG GKWVFGGGSG GGSEGLFSPR SGGSNGGNGL SGSDSGVGGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTACTT CATCTTCTTA CAGTGTTGAG ACTAAAGATA GAGTTCTGTT TTGTGTGTGT 60
GTTATTGTTA TTATATAGAA ACAAAACCCA AAGGCCAAAA GTTTAACAGA AGCTTCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Fal-037426	Ficedula albicollis	32.08	4.70e-02	31.60
IUUC-Gma-042930	Glycine max	58.20	3.00e-91	327.00
IUUC-Mtr-058756	Medicago truncatula	60.00	7.00e-89	319.00
IUUC-Mac-064563	Musa acuminata	61.59	8.00e-94	335.00
IUUC-Ome-081266	Oryza meridionalis	58.67	7.00e-51	192.00
IUUC-Opu-083799	Oryza punctata	69.44	4.00e-50	190.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence