iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058543

Ensembl Protein ID

KEH23172

UniProt Accession

A0A072U0H4; A0A072U0H4_MEDTR

Genbank Protein ID

KEH23172.1

Protein Name

PHD finger alfin-like protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g068590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g068590	KEH23172	KEH23172

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.50e-08	34.9	187	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           + C  Cg +++ ++  + C++C++w+H +C+k++   + ++ +++ Cp+C+
   Q: 187  TLCGSCGGNYNADEFWIGCDICERWYHGKCVKIT-PAKAESIKQYKCPQCS 236
           68999*****************************.888888889******6 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEMASSPRTV EEIFKDYSAR RIAVVRALTQ DVDEFYGLCD PDKDNLCLYG HNNESWEVTL 60
PAEEVPPELP EPALGINFAR DGMNRRDWLS LVAVHSDSWL LSVAFYLGAR LNRNERKRLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAACATTA ATCCACCTCA CAAACCTACT AAACCTAGTT TAGTTTAACC TAAAACATTA 60
GCGGTGTTAT ATCACAAACG ACACTTTTGT GTAACCGTAG AGAATTGTTA CCTTAGTAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

mtr:MTR_7g068590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025225	Ciona intestinalis	45.45	3.00e-09	57.00
IUUC-Pan-092346	Papio anubis	52.27	1.00e-11	64.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence