iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058321

Ensembl Protein ID

KEH23437

UniProt Accession

A0A072U174; A0A072U174_MEDTR

Genbank Protein ID

KEH23437.1

Protein Name

3-ketoacyl-CoA synthase

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g081695

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g081695	KEH23437	KEH23437

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-13	52.2	559	596

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           +sv+++a+  sd t+l+s++d g +++WD+rtg+ +++
   Q: 559  GSVRSVAWlhSDqTILSSCTDMGGVRLWDVRTGKIVQT 596
           68*******999666666666699**********9985 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTESKQDTPL LAPLSSRILP DFKKSVKLKY VKLGYHYLIT HGMYLFLSPL VVLIAAQLST 60
FSLNDIYDIW ENLQYNLVSV IICSTLLVFL STFYFMTCPR PVYLVNFSCY NPEESRKCTN 120

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Nucleotide Sequence
(Fasta)

ATGACAGAAT CAAAACAAGA TACACCCTTG CTAGCGCCAT TGTCGTCGCG GATCCTTCCA 60
GATTTCAAAA AATCAGTTAA ATTGAAGTAT GTGAAGCTTG GTTATCATTA CCTGATCACT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR012392--3-ktacl-CoA_syn
IPR013747--ACP_syn_III_C
IPR013601--FAE1_typ3_polyketide_synth
IPR016039--Thiolase-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08541--ACP_syn_III_C
PF08392--FAE1_CUT1_RppA
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016747--F:transferase activity, transferring acyl groups other than amino-acyl groups
GO:0006633--P:fatty acid biosynthetic process

KEGG

mtr:MTR_7g081695

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence