iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__1604__AT3G52450.1	fgenesh2_kg.5__1604__AT3G52450.1	fgenesh2_kg.5__1604__AT3G52450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-34	119.0	6	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           e+p++f+CpIsl++M+dPv++++Gitydr+sIekwl sg+k +cPvt+q +te+dl+Pn+tlrrliq+wc  n+
   Q: 6    EIPSFFVCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKnSCPVTKQVITETDLTPNHTLRRLIQSWCTLNA 79
           69**********************************999999****************************9876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDQEIEIPSF FVCPISLDIM KDPVIVSTGI TYDRESIEKW LFSGKKNSCP VTKQVITETD 60
LTPNHTLRRL IQSWCTLNAS YGIERIPTPK PPICKSEIEK LIKDSSTSHL NQVKCLKRLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTAACTTAT TCAAACCAAT TCACATAGCT CCTAAATCTC AACGAATACA CTTTGAGGCA 60
ACATTTTCTT TTGTTGAGAT TCGTTCGTCG TTTCTATTCA TTAAGTCTTA CTTCTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005829--C:cytosol
GO:0004842--F:ubiquitin-protein transferase activity
GO:0051865--P:protein autoubiquitination
GO:0010200--P:response to chitin
GO:0009414--P:response to water deprivation

KEGG

aly:ARALYDRAFT_485612

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000554	Aegilops tauschii	42.24	2.00e-89	322.00
IUUC-Ath-007272	Arabidopsis thaliana	97.70	0.00e+00	772.00
IUUC-Bol-015372	Brassica oleracea	92.41	0.00e+00	747.00
IUUC-Bra-016912	Brassica rapa	92.41	0.00e+00	747.00
IUUC-Gma-043412	Glycine max	58.72	4.00e-140	490.00
IUUC-Mtr-058052	Medicago truncatula	59.23	5.00e-145	506.00
IUUC-Mac-065005	Musa acuminata	42.65	2.00e-95	341.00
IUUC-Pop-099305	Populus trichocarpa	60.05	1.00e-148	518.00
IUUC-Tae-122744	Triticum aestivum	42.24	1.00e-88	319.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence