iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016912

Ensembl Protein ID

Bra006925.1-P

UniProt Accession

M4CRT3; M4CRT3_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006925	Bra006925.1	Bra006925.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-34	118.1	6	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           e+p +flCpIsl++M+dPv++++Gitydr sIekwl +g+k tcPvt+q +te+dl+Pn+tlrrliq+wc  n+s
   Q: 6    EIPTFFLCPISLDIMKDPVIVSTGITYDRDSIEKWLFTGKKnTCPVTKQVITETDLTPNHTLRRLIQSWCTLNAS 80
           699*********************************999999****************************98865 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDQEIEIPTF FLCPISLDIM KDPVIVSTGI TYDRDSIEKW LFTGKKNTCP VTKQVITETD 60
LTPNHTLRRL IQSWCTLNAS HGIERIPTPK PPISKSEIEK LIKDSSSSHQ NQVKCLKRLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCAAG AGATAGAGAT TCCTACTTTC TTTCTATGTC CGATCTCTCT AGATATCATG 60
AAGGACCCGG TGATAGTTTC CACCGGAATA ACCTACGACA GAGACAGCAT CGAGAAGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000554	Aegilops tauschii	42.24	7.00e-93	333.00
IUUC-Aly-005797	Arabidopsis lyrata	92.41	0.00e+00	752.00
IUUC-Ath-007272	Arabidopsis thaliana	92.64	0.00e+00	738.00
IUUC-Bol-015372	Brassica oleracea	100.00	0.00e+00	817.00
IUUC-Gma-043412	Glycine max	58.72	1.00e-143	502.00
IUUC-Mtr-058052	Medicago truncatula	58.31	4.00e-146	510.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence