iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112276

Ensembl Protein ID

PGSC0003DMT400054949

UniProt Accession

M1BX42; M1BX42_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400021327	PGSC0003DMT400054949	PGSC0003DMT400054949

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-30	106.5	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++f+CpIsle+M+dPv++++Gitydr++Iekw+ s ++  cP t+q+lt  +l+Pn tlrr iq+wc  n+
   Q: 5    QVPPYFICPISLEMMKDPVTISTGITYDRENIEKWIFSAKNnICPATKQSLTCIELTPNVTLRRFIQSWCTINA 78
           69**********************************6655558***************************8776 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEEIQVPPYF ICPISLEMMK DPVTISTGIT YDRENIEKWI FSAKNNICPA TKQSLTCIEL 60
TPNVTLRRFI QSWCTINASH GIERFPTPKP PVSKPQIIKL LKEAKSPKMQ MKSLKRLRSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATATTTTCT AGTTCTTGAT TTCTCCTTCT TTGATTAATC TTGAAATTTT CCAAAATATA 60
CAAATGGAAG AAATTCAAGT ACCTCCTTAT TTTATTTGTC CGATTTCTCT AGAGATGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102603282

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002430	Amborella trichopoda	50.74	1.00e-114	404.00
IUUC-Ath-007272	Arabidopsis thaliana	55.09	2.00e-126	444.00
IUUC-Bol-016472	Brassica oleracea	56.57	3.00e-124	437.00
IUUC-Bra-016841	Brassica rapa	57.66	6.00e-138	482.00
IUUC-Gma-043412	Glycine max	63.40	2.00e-151	527.00
IUUC-Mtr-058052	Medicago truncatula	62.89	1.00e-150	525.00
IUUC-Mac-065005	Musa acuminata	51.72	7.00e-117	412.00
IUUC-Pop-099305	Populus trichocarpa	64.81	1.00e-155	541.00
IUUC-Sly-111344	Solanum lycopersicum	93.38	0.00e+00	779.00
IUUC-Tur-126719	Triticum urartu	42.76	6.00e-93	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence