iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099883

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_796254; POPTR_0001s16210g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s16210	POPTR_0001s16210.1	POPTR_0001s16210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	36.3	99	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d    ++ +++lp C+H fh+dC+ +w       +   +CPlCr
   Q: 99   CAVCLSDAvegEK-VRLLPkCNHGFHLDCIDMW------FQSYSTCPLCR 141
           *******977555.*******************......888899****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGRLDDSATM EITGKVMVVA IVILFLVVVF VIFLHLYAKW FWWRIEEPAH PQQSRRRQRR 60
RYVFNPGQDP VRRGLELSIL RSLPLVIFQP KDFPGGLECA VCLSDAVEGE KVRLLPKCNH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTCAAAGA CTCTGGTCTG CTCTGTATTT GTTTGCTTAA ATTAAAATCT GCTTAGACCC 60
AAACATTGTA TACTAGTTCT CCTTTTCCTC TTCCCTGTCC CAAAAGTCCA AGCCACCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s16210g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014880	Brachypodium distachyon	47.50	6.00e-29	120.00
IUUC-Gma-043714	Glycine max	49.51	5.00e-56	210.00
IUUC-Mtr-058409	Medicago truncatula	58.37	2.00e-54	205.00
IUUC-Tca-121232	Theobroma cacao	56.23	1.00e-61	229.00
IUUC-Tae-122954	Triticum aestivum	44.69	2.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence