iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058462

Ensembl Protein ID

KEH18706

UniProt Accession

A0A072TNB4; A0A072TNB4_MEDTR

Genbank Protein ID

KEH18706.1

Protein Name

Ubiquitin ligase cop1, putative

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g027985

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g027985	KEH18706	KEH18706

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-26	90.2	741	772

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H+ + ++++f  sd ++++sGsdD+++k+W++
   Q: 741  HQKRAWSVHFsaSDpKMFASGSDDCSVKLWNI 772
           888899******999***************96 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTANSGRGTE EHKRKINDPL PRSPRLCTPI RKENVIGNEN NILTRNFASL AGSGPPSTSF 60
CSTTDPKHIV EKLHVRNNKN LNVALGIPPH NFRQHQRNQL AIESKYNNSL SRKIAQKSLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTCTTT ATTCTGAACT CAAGTATTTA TTGGTTTCAC TATACATTAC TTGTCATTGT 60
TGTGATCAAG ATATTTTCCT CTCCAATAAC TCTCTGGTTA GTCCATATGT TCTTTATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00069--Pkinase
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0005524--F:ATP binding
GO:0016874--F:ligase activity
GO:0004672--F:protein kinase activity
GO:0009658--P:chloroplast organization
GO:0010100--P:negative regulation of photomorphogenesis
GO:0009640--P:photomorphogenesis
GO:0010017--P:red or far-red light signaling pathway
GO:2000028--P:regulation of photoperiodism, flowering
GO:0009637--P:response to blue light
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0048575--P:short-day photoperiodism, flowering

KEGG

mtr:MTR_8g027985

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043294	Glycine max	63.14	0.00e+00	1203.00
IUUC-Ppe-101782	Prunus persica	48.81	0.00e+00	838.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence