iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057888

Ensembl Protein ID

KEH20753

UniProt Accession

A0A072TV56; A0A072TV56_MEDTR

Genbank Protein ID

KEH20753.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g089730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g089730	KEH20753	KEH20753

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.10e-28	99.7	57	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqW 47
           ksLLdltc tV +mikgktpe+iR+tF i+nDftpeEe++vR+EnqW
   Q: 57   KSLLDLTCETVVNMIKGKTPEQIRETFHIKNDFTPEEEEEVRRENQW 103
           89********************************************* PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MIEDDCADNA IPVQNVAGMI LAKVIEYCKK HVDGDFVKVD QGTLFDLILA SNYLDIKSLL 60
DLTCETVVNM IKGKTPEQIR ETFHIKNDFT PEEEEEVRRE NQWVFE 106

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Nucleotide Sequence
(Fasta)

ATGATCGAAG ACGATTGTGC CGACAACGCT ATCCCTGTTC AAAACGTGGC GGGAATGATT 60
TTGGCGAAGG TGATTGAATA CTGTAAGAAG CATGTGGATG GTGATTTCGT GAAGGTTGAT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_8g089730

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence