iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100093

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_782680; POPTR_0005s05880g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s05880	POPTR_0005s05880.1	POPTR_0005s05880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-29	101.7	11	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp  f+CpIsl++M+ Pv l++G+tydr+sI++wl+sg++tcP t+q l ++++vPn tl+rliq w ++ +
   Q: 11   VPNLFRCPISLDVMKSPVSLCTGVTYDRTSIQRWLDSGNNTCPATMQVLNSKEFVPNRTLQRLIQIWSDSVQ 82
           899****************************************************************98876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVRDVNLYVT VPNLFRCPIS LDVMKSPVSL CTGVTYDRTS IQRWLDSGNN TCPATMQVLN 60
SKEFVPNRTL QRLIQIWSDS VQTQNDLREE VEVLVKEMRA QKGKVDHLSK FICFAKESEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGAAAA CAAAAAAAAA TGGTGAGAGA CGTTAATTTG TACGTTACGG TCCCTAATCT 60
CTTCCGGTGT CCCATCTCAC TTGACGTGAT GAAATCACCT GTGAGTCTCT GTACCGGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0005s05880g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-057795	Medicago truncatula	57.51	3.00e-129	454.00
IUUC-Ome-081099	Oryza meridionalis	38.82	2.00e-35	142.00
IUUC-Sbi-113917	Sorghum bicolor	76.39	3.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence