iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112019

Ensembl Protein ID

PGSC0003DMT400031604

UniProt Accession

M1AVW9; M1AVW9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400012125	PGSC0003DMT400031603	PGSC0003DMT400031603
PGSC0003DMG400012125	PGSC0003DMT400031604	PGSC0003DMT400031604
PGSC0003DMG400012125	PGSC0003DMT400031605	PGSC0003DMT400031605
PGSC0003DMG400012125	PGSC0003DMT400031606	PGSC0003DMT400031606

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-21	76.3	428	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H++ vtc++f  +d +l++sGs Dg+i++W+++
   Q: 428  HNNYVTCVEFnpTDdNLFISGSIDGKIRLWEVH 460
           999********9556****************86 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGNYSEFEEE CFFDSREEIS SVSDLGSDCN ETCVRNLGDE CVLGYDFWNK DPESVDERRD 60
RFLKWIGSSS SWDSPDGKEQ GGVTTHYRKM SVDRIRDGGE TVLANSDSQE SCFSGRSSQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAGAATAA ACGACTCATT TTTTTCGGAA TAGATTTCTT CAAAGACTTT TATTTTTTCT 60
TCTAATTTTA TTGCTAGGGA TTGTTTGGAT TTCTCCAATT TTTGTGTTCA GTCTTGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043313	Glycine max	50.07	0.00e+00	630.00
IUUC-Lpe-051594	Leersia perrieri	37.93	2.00e-105	375.00
IUUC-Mtr-058554	Medicago truncatula	47.98	3.00e-180	624.00
IUUC-Pop-099922	Populus trichocarpa	52.61	0.00e+00	693.00
IUUC-Sit-110689	Setaria italica	41.16	2.00e-138	484.00
IUUC-Sly-111162	Solanum lycopersicum	94.86	0.00e+00	1416.00
IUUC-Sbi-114128	Sorghum bicolor	41.01	1.00e-140	493.00
IUUC-Tca-121771	Theobroma cacao	52.09	0.00e+00	676.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence