iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-084628

Ensembl Protein ID

ORUFI01G08980.1

UniProt Accession

A0A0E0MTG6; A0A0E0MTG6_ORYRU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI01G08980	ORUFI01G08980.1	ORUFI01G08980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-14	52.6	1157	1189
E3 activity/RING/U-box	4.70e-26	91.8	424	496

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           Ht  +t+la   s+  l sGs D ti+vW lr+
   Q: 1157 HTKAITSLAVlhSEEKLFSGSLDRTIRVWQLRD 1189
           9999*****7777799*************9987 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+ +++ dPv+l++G+ty+r++I++wl++g+ tcP+tr++l+   l   n++l+rli aw+++n 
   Q: 424  TPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRHRLHGAHLpSTNYVLKRLIAAWRDQNP 496
           699***************************************************9***************996 PP

Organism

Oryza rufipogon

Protein Sequence
(Fasta)

MAGPTPTYSS VVAHTAAFLA ELIADPLLRR HLLSAAAAAG GVGRKQRQHP AATLQALSLV 60
LDALDTAASA PPSLSSLRAA ERLLLSLLVA TPLSCLLLAL ASASRRRGGA AAAAAAAVLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGGC CGACGCCGAC GTACTCGTCG GTGGTGGCGC ACACAGCGGC GTTCCTCGCG 60
GAGCTCATCG CCGACCCGCT CCTCCGGCGA CACCTGCTCT CCGCCGCCGC GGCGGCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	74.76	0.00e+00	1364.00
IUUC-Atr-002936	Amborella trichopoda	46.58	0.00e+00	743.00
IUUC-Bdi-014680	Brachypodium distachyon	69.33	0.00e+00	1565.00
IUUC-Gma-044085	Glycine max	47.71	0.00e+00	894.00
IUUC-Hvu-047711	Hordeum vulgare	76.50	2.00e-166	577.00
IUUC-Lpe-051224	Leersia perrieri	75.81	0.00e+00	1456.00
IUUC-Mtr-058452	Medicago truncatula	41.94	0.00e+00	917.00
IUUC-Mac-064685	Musa acuminata	55.75	0.00e+00	1031.00
IUUC-Obr-076347	Oryza brachyantha	73.45	0.00e+00	1573.00
IUUC-Ogl-077695	Oryza glaberrima	94.26	0.00e+00	1890.00
IUUC-Ogu-078873	Oryza glumaepatula	93.33	0.00e+00	1885.00
IUUC-Oin-079745	Oryza indica	87.48	0.00e+00	840.00
IUUC-Olo-081050	Oryza longistaminata	84.02	0.00e+00	792.00
IUUC-Ome-081604	Oryza meridionalis	94.15	0.00e+00	1837.00
IUUC-Oni-082155	Oryza nivara	96.43	0.00e+00	1955.00
IUUC-Opu-083775	Oryza punctata	83.03	0.00e+00	1525.00
IUUC-Osa-086224	Oryza sativa	99.74	5.00e-178	616.00
IUUC-Pop-099122	Populus trichocarpa	47.51	0.00e+00	729.00
IUUC-Ppe-101249	Prunus persica	50.26	0.00e+00	843.00
IUUC-Smo-109545	Selaginella moellendorffii	33.50	3.00e-126	446.00
IUUC-Sit-110152	Setaria italica	73.68	0.00e+00	1330.00
IUUC-Sly-111919	Solanum lycopersicum	46.91	0.00e+00	862.00
IUUC-Stu-111946	Solanum tuberosum	40.97	0.00e+00	945.00
IUUC-Sbi-114464	Sorghum bicolor	66.96	0.00e+00	1532.00
IUUC-Tca-121369	Theobroma cacao	50.05	0.00e+00	931.00
IUUC-Tae-123295	Triticum aestivum	72.03	0.00e+00	1667.00
IUUC-Tur-126163	Triticum urartu	73.92	0.00e+00	1100.00
IUUC-Vvi-131144	Vitis vinifera	51.74	0.00e+00	976.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence