iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121369

Ensembl Protein ID

EOY30732

UniProt Accession

A0A061GNL9; A0A061GNL9_THECC

Genbank Protein ID

EOY30732.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037843

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037843	EOY30732	EOY30732

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-26	93.7	391	462
E3 adaptor/Cullin RING/DCX/DWD	1.00e-14	55.0	1092	1121

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+CpI+  ++ dPv+l++G+ty+r++I++wl++g++tcP+trq l++++l + n++l+rli +w e+n
   Q: 391  PPKDFVCPITSHIFDDPVTLETGQTYERRAIQEWLDRGNSTCPITRQNLQSTQLpKTNYVLKRLIGSWQEKN 462
           79******************************************************************9987 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H+ +vt+l    s+ +l sGs D+t +vW+
   Q: 1092 HSKPVTSLYIlqSGERLYSGSLDKTARVWS 1121
           999*****879666***************9 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTTAATATTS SRILHHTTAF TSEILSQSEL RHRILSTLRR KLLPSDQLTL KPLNLAAETL 60
ENAVSASNAS IQSSSLRVAQ KLLLSYPEAT FSSFLLSLIY SLSNQPIKSS LSLLQVFYLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTACAACAAT GGCACAGAAT GCAGTAAGTC TTCAGAGAAC CTCCTCAACA ATGTTTGGTA 60
TCAGCCTGAA GAAATATTTC CAGTGAATGG AATTCCTGAG CAGAGGCAGC ATGCCTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	53.43	0.00e+00	969.00
IUUC-Atr-002936	Amborella trichopoda	45.72	0.00e+00	1132.00
IUUC-Bdi-014680	Brachypodium distachyon	52.81	0.00e+00	985.00
IUUC-Gma-044256	Glycine max	60.09	0.00e+00	1533.00
IUUC-Hvu-047711	Hordeum vulgare	51.26	9.00e-103	366.00
IUUC-Lpe-051224	Leersia perrieri	51.35	0.00e+00	838.00
IUUC-Mtr-058452	Medicago truncatula	61.05	0.00e+00	1447.00
IUUC-Mac-064685	Musa acuminata	55.02	0.00e+00	1268.00
IUUC-Obr-076347	Oryza brachyantha	47.20	0.00e+00	976.00
IUUC-Ogl-077695	Oryza glaberrima	53.40	0.00e+00	843.00
IUUC-Ogu-078873	Oryza glumaepatula	53.35	0.00e+00	869.00
IUUC-Oin-079745	Oryza indica	54.64	2.00e-148	519.00
IUUC-Olo-081050	Oryza longistaminata	50.74	7.00e-141	493.00
IUUC-Ome-081604	Oryza meridionalis	52.89	0.00e+00	861.00
IUUC-Oni-082155	Oryza nivara	45.86	0.00e+00	869.00
IUUC-Opu-083775	Oryza punctata	49.38	0.00e+00	772.00
IUUC-Oru-084628	Oryza rufipogon	43.94	0.00e+00	857.00
IUUC-Osa-086224	Oryza sativa	51.56	2.00e-87	315.00
IUUC-Pop-099122	Populus trichocarpa	65.71	0.00e+00	1101.00
IUUC-Ppe-101249	Prunus persica	66.95	0.00e+00	1540.00
IUUC-Sit-110152	Setaria italica	55.32	0.00e+00	1023.00
IUUC-Sly-111919	Solanum lycopersicum	56.75	0.00e+00	1229.00
IUUC-Stu-111946	Solanum tuberosum	57.74	0.00e+00	1442.00
IUUC-Sbi-114464	Sorghum bicolor	47.09	0.00e+00	1073.00
IUUC-Tae-123295	Triticum aestivum	45.72	0.00e+00	1036.00
IUUC-Tur-126163	Triticum urartu	50.70	0.00e+00	776.00
IUUC-Vvi-131144	Vitis vinifera	71.74	0.00e+00	1600.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence