• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-063386
Ensembl Protein ID ENSMUSP00000068103.3
UniProt Accession Q5SSI6; UTP18_MOUSE
Genbank Protein ID CAI25710.1
Protein Name U3 small nucleolar RNA-associated protein 18 homolog; WD repeat-containing protein 50
Genbank Nucleotide ID AL663078
Gene Name Utp18; Wdr50
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000054079.12 ENSMUST00000066888.9 ENSMUSP00000068103.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
miRNAMapRAID2
Protein-protein Interaction
IIDPINAHINT
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
Phospho.ELMUniProtPHOSIDAmUbiSiDa
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-07 32.8 385 412
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 10   af.sd.tllvsGsdDgtikvWDlrtgvl 35
            f sd +++ + s +g ++vWD+ + ++
   Q: 385  TFsSDsKRIYTYSENGEVYVWDVNSRKC 412
           47778899**************987666 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     Involved in nucleolar processing of pre-18S ribosomal RNA.
 Involved in nucleolar processing of pre-18S ribosomal RNA.
Protein Sequence
(Fasta)
MPPERKSRTR RDRRAGATPG RKARPGSGST PAKAARSSQR TQPAEPRAAP SAGSAAAAAE 60
EEESRLRQRN RLTLEDDKPA AERCLEQLVF GDVEDDEDAL LQRLRSSRGQ LHGSSDESEV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-063386|E3,WD_repeat|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGACTCCTTC CGGCTCCCCG GGGCCGGGCC GAGGAGAAGA GCGAGCCGCC CCGGCACATG 60
CGCAGTGGTA CTCCACGTGA ACGTCGGCGT TTTCCCCTCA GCCCTGAGGA TGCCGCCCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-063386|E3,WD_repeat|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
SMART

SM00320--WD40
Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG mmu:217109
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000184 Aegilops tauschii 37.41 1.00e-76 280.00
IUUC-Aml-002252 Ailuropoda melanoleuca 83.85 0.00e+00 795.00
IUUC-Atr-002575 Amborella trichopoda 41.03 2.00e-73 270.00
IUUC-Aly-006512 Arabidopsis lyrata 36.73 6.00e-75 275.00
IUUC-Ath-007244 Arabidopsis thaliana 35.25 1.00e-71 264.00
IUUC-Ago-007895 Ashbya gossypii 24.78 2.00e-33 136.00
IUUC-Acl-008343 Aspergillus clavatus 25.38 1.00e-32 134.00
IUUC-Afl-008445 Aspergillus flavus 25.27 1.00e-41 164.00
IUUC-Aor-009986 Aspergillus oryzae 25.64 3.00e-40 160.00
IUUC-Ame-011338 Astyanax mexicanus 53.50 2.00e-145 509.00
IUUC-Bgr-012201 Blumeria graminis 28.34 3.00e-41 163.00
IUUC-Bta-013058 Bos taurus 77.54 0.00e+00 776.00
IUUC-Bci-013619 Botrytis cinerea 24.10 2.00e-34 140.00
IUUC-Bdi-014771 Brachypodium distachyon 36.68 7.00e-73 268.00
IUUC-Bol-015230 Brassica oleracea 39.11 3.00e-71 263.00
IUUC-Bra-017041 Brassica rapa 39.45 2.00e-69 256.00
IUUC-Cel-018293 Caenorhabditis elegans 28.72 8.00e-51 194.00
IUUC-Cja-019503 Callithrix jacchus 84.70 0.00e+00 744.00
IUUC-Cfa-020743 Canis familiaris 82.98 0.00e+00 773.00
IUUC-Cpo-021488 Cavia porcellus 83.57 0.00e+00 766.00
IUUC-Cre-022926 Chlamydomonas reinhardtii 34.17 5.00e-61 228.00
IUUC-Csa-023110 Chlorocebus sabaeus 84.89 0.00e+00 798.00
IUUC-Cin-025208 Ciona intestinalis 41.30 2.00e-73 269.00
IUUC-Cme-027351 Cyanidioschyzon merolae 28.08 2.00e-44 173.00
IUUC-Dre-027524 Danio rerio 47.26 1.00e-111 396.00
IUUC-Dno-029243 Dasypus novemcinctus 82.56 0.00e+00 764.00
IUUC-Dor-030110 Dipodomys ordii 68.75 0.00e+00 707.00
IUUC-Dse-031217 Dothistroma septosporum 28.38 5.00e-30 125.00
IUUC-Dme-031999 Drosophila melanogaster 31.99 5.00e-53 202.00
IUUC-Eca-034350 Equus caballus 82.92 0.00e+00 784.00
IUUC-Eeu-034991 Erinaceus europaeus 75.89 0.00e+00 716.00
IUUC-Fal-036614 Ficedula albicollis 59.01 2.00e-150 525.00
IUUC-Gmo-039183 Gadus morhua 49.48 8.00e-123 434.00
IUUC-Gga-040922 Gallus gallus 59.38 2.00e-165 575.00
IUUC-Gac-041475 Gasterosteus aculeatus 53.12 3.00e-127 448.00
IUUC-Gma-043598 Glycine max 34.15 9.00e-72 264.00
IUUC-Ggo-044517 Gorilla gorilla 85.03 0.00e+00 795.00
IUUC-Hsa-045741 Homo sapiens 84.87 0.00e+00 786.00
IUUC-Hvu-047463 Hordeum vulgare 37.85 9.00e-31 125.00
IUUC-Itr-048128 Ictidomys tridecemlineatus 84.45 0.00e+00 789.00
IUUC-Kpa-049335 Komagataella pastoris 31.11 9.00e-47 181.00
IUUC-Lch-049816 Latimeria chalumnae 60.40 2.00e-161 562.00
IUUC-Lpe-051140 Leersia perrieri 35.39 5.00e-73 268.00
IUUC-Loc-051942 Lepisosteus oculatus 54.47 7.00e-147 514.00
IUUC-Laf-054245 Loxodonta africana 84.03 0.00e+00 778.00
IUUC-Meu-056300 Macropus eugenii 66.13 4.00e-142 497.00
IUUC-Mor-057184 Magnaporthe oryzae 24.49 9.00e-31 128.00
IUUC-Mtr-058019 Medicago truncatula 36.30 3.00e-67 249.00
IUUC-Mga-060179 Meleagris gallopavo 62.96 5.00e-155 540.00
IUUC-Mvi-060435 Microbotryum violaceum 32.46 3.00e-51 196.00
IUUC-Mdo-062187 Monodelphis domestica 62.90 3.00e-172 598.00
IUUC-Mpu-066084 Mustela putorius furo 83.78 0.00e+00 793.00
IUUC-Mlu-068130 Myotis lucifugus 78.04 0.00e+00 772.00
IUUC-Nle-069743 Nomascus leucogenys 78.84 0.00e+00 727.00
IUUC-Opr-071111 Ochotona princeps 84.71 8.00e-175 606.00
IUUC-Ont-071979 Oreochromis niloticus 56.31 9.00e-140 490.00
IUUC-Ocu-073754 Oryctolagus cuniculus 79.40 0.00e+00 741.00
IUUC-Oba-075007 Oryza barthii 36.13 3.00e-72 266.00
IUUC-Obr-076447 Oryza brachyantha 35.55 7.00e-74 271.00
IUUC-Ogl-077733 Oryza glaberrima 36.13 2.00e-72 266.00
IUUC-Ogu-078828 Oryza glumaepatula 36.13 3.00e-72 266.00
IUUC-Oin-080152 Oryza indica 35.90 5.00e-72 265.00
IUUC-Olo-080983 Oryza longistaminata 40.38 1.00e-71 264.00
IUUC-Oni-082443 Oryza nivara 35.90 7.00e-72 265.00
IUUC-Opu-083771 Oryza punctata 36.83 4.00e-73 268.00
IUUC-Oru-084272 Oryza rufipogon 35.90 7.00e-72 265.00
IUUC-Osa-085885 Oryza sativa 35.99 6.00e-73 268.00
IUUC-Olu-087644 Ostreococcus lucimarinus 25.71 8.00e-19 88.20
IUUC-Oga-088834 Otolemur garnettii 83.47 0.00e+00 777.00
IUUC-Oar-089712 Ovis aries 84.02 0.00e+00 719.00
IUUC-Pan-092561 Papio anubis 85.30 0.00e+00 800.00
IUUC-Ppa-095397 Physcomitrella patens 42.72 4.00e-73 268.00
IUUC-Pfo-097068 Poecilia formosa 49.80 6.00e-136 477.00
IUUC-Pop-099471 Populus trichocarpa 36.59 2.00e-66 246.00
IUUC-Ppe-101684 Prunus persica 37.22 8.00e-70 258.00
IUUC-Pva-102851 Pteropus vampyrus 80.46 0.00e+00 757.00
IUUC-Pgr-103370 Puccinia graminis 27.33 6.00e-42 165.00
IUUC-Ptt-103838 Puccinia triticina 27.58 2.00e-41 163.00
IUUC-Rno-104910 Rattus norvegicus 90.58 0.00e+00 885.00
IUUC-Sce-106258 Saccharomyces cerevisiae 29.51 2.00e-41 163.00
IUUC-Sja-107746 Schizosaccharomyces japonicus 28.82 1.00e-46 180.00
IUUC-Spo-108268 Schizosaccharomyces pombe 30.09 7.00e-49 188.00
IUUC-Smo-108815 Selaginella moellendorffii 39.76 1.00e-73 270.00
IUUC-Sit-109706 Setaria italica 35.52 8.00e-74 271.00
IUUC-Sly-111533 Solanum lycopersicum 38.41 3.00e-76 279.00
IUUC-Stu-112853 Solanum tuberosum 38.86 4.00e-79 288.00
IUUC-Sbi-114747 Sorghum bicolor 35.45 2.00e-74 273.00
IUUC-Ssc-115916 Sus scrofa 84.24 0.00e+00 749.00
IUUC-Tgu-117291 Taeniopygia guttata 58.74 1.00e-143 503.00
IUUC-Tru-118724 Takifugu rubripes 47.11 2.00e-127 449.00
IUUC-Tsy-118928 Tarsius syrichta 72.07 2.00e-175 608.00
IUUC-Tca-121229 Theobroma cacao 37.34 5.00e-77 281.00
IUUC-Tae-125218 Triticum aestivum 37.41 1.00e-76 280.00
IUUC-Tur-126082 Triticum urartu 32.02 5.00e-46 178.00
IUUC-Ttr-128904 Tursiops truncatus 76.84 0.00e+00 683.00
IUUC-Vpa-130817 Vicugna pacos 82.77 0.00e+00 772.00
IUUC-Vvi-131395 Vitis vinifera 36.33 5.00e-79 288.00
IUUC-Xtr-132971 Xenopus tropicalis 59.00 7.00e-148 517.00
IUUC-Xma-133391 Xiphophorus maculatus 53.07 1.00e-134 473.00
IUUC-Yli-134613 Yarrowia lipolytica 31.71 4.00e-50 192.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved