iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-040707

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000345

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000014791.5	ENSGALT00000023879.5	ENSGALP00000023833.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-49	162.5	669	699
UBD/Beta-Prp	2.30e-97	326.2	47	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +v+cla+ ++ +++vs+s+D+++++W+
   Q: 669  GHHQEVWCLALsPNgDYVVSASHDKSLRLWE 699
           78899*******777***************8 PP

UBD/Beta-Prp

   S: 76   ikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           + vwd ++g+ v +lkg +++v +l+ sp+g +l++G +d  ir++ l +g+ +   ++gh+++v+ +++++ g  lvsGs+D+ v +W
   Q: 47   VFVWDARKGEKVLILKGSKHEVSCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASV-AFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVW 134
           6699999999999999999999999999999999999999999999999999999.999999999999999999999999999999999 PP
   S: 165  dlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
           d+ +++ l++l+g h+d+v+ + f ++++ lv+ ++d+ vk wdl t++c +tl gh++ v+ +++ ++++rl++g++D  +r+Wd++
   Q: 135  DVINESGLYRLKG-HKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDIT 221
           9999999999999.99999999999999999999999999999999999999999999999999999999999999999999999975 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MGLTRQYLRY APAALFGLVG SARGNPAFVT LRGERGRCVA VPACEHVFVW DARKGEKVLI 60
LKGSKHEVSC LRPSPDGLHL AVGYEDGSIR IFSLLSGEAS VAFNGHKAAV TALQYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGCGCCTC CGGTGCCGGC CGTGGGGCGC TGGCACGTGC GGCCCGCGGC ATCCCCTCGG 60
CATCCCCTCG GCGCCGCCGC CGCCATGGGG CTCACGCGGC AGTACCTGCG CTACGCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	38.64	6.00e-154	538.00
IUUC-Aml-001245	Ailuropoda melanoleuca	80.11	0.00e+00	1453.00
IUUC-Atr-002700	Amborella trichopoda	38.94	1.00e-174	607.00
IUUC-Apl-004164	Anas platyrhynchos	89.11	0.00e+00	1175.00
IUUC-Aca-004765	Anolis carolinensis	76.20	0.00e+00	1386.00
IUUC-Aly-006503	Arabidopsis lyrata	40.04	5.00e-176	611.00
IUUC-Ath-006848	Arabidopsis thaliana	40.02	7.00e-180	624.00
IUUC-Ago-007909	Ashbya gossypii	35.65	5.00e-149	521.00
IUUC-Acl-008238	Aspergillus clavatus	38.71	1.00e-179	623.00
IUUC-Afl-008544	Aspergillus flavus	39.87	5.00e-180	624.00
IUUC-Afu-008868	Aspergillus fumigatus	38.72	2.00e-178	619.00
IUUC-Ani-009367	Aspergillus nidulans	38.38	7.00e-171	594.00
IUUC-Ang-009732	Aspergillus niger	38.67	2.00e-178	619.00
IUUC-Aor-010140	Aspergillus oryzae	39.73	5.00e-180	624.00
IUUC-Ate-010572	Aspergillus terreus	39.02	1.00e-177	617.00
IUUC-Ame-010956	Astyanax mexicanus	74.87	0.00e+00	830.00
IUUC-Bgr-012296	Blumeria graminis	36.78	2.00e-171	596.00
IUUC-Bta-012716	Bos taurus	80.47	0.00e+00	1469.00
IUUC-Bci-013699	Botrytis cinerea	36.27	2.00e-161	563.00
IUUC-Bdi-014525	Brachypodium distachyon	38.97	1.00e-163	570.00
IUUC-Bol-015117	Brassica oleracea	40.22	1.00e-175	610.00
IUUC-Bra-016869	Brassica rapa	40.47	1.00e-177	617.00
IUUC-Cel-018570	Caenorhabditis elegans	34.93	3.00e-132	465.00
IUUC-Cja-019425	Callithrix jacchus	79.44	0.00e+00	1418.00
IUUC-Cfa-020787	Canis familiaris	80.32	0.00e+00	1456.00
IUUC-Cpo-021729	Cavia porcellus	80.41	0.00e+00	1027.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.62	2.00e-107	383.00
IUUC-Csa-024098	Chlorocebus sabaeus	80.37	0.00e+00	1436.00
IUUC-Cho-024495	Choloepus hoffmanni	68.64	0.00e+00	811.00
IUUC-Cin-025245	Ciona intestinalis	49.05	1.00e-165	576.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	38.85	8.00e-169	587.00
IUUC-Cne-026835	Cryptococcus neoformans	45.55	5.00e-129	455.00
IUUC-Cme-027162	Cyanidioschyzon merolae	25.51	5.00e-38	153.00
IUUC-Dre-027874	Danio rerio	69.95	0.00e+00	1276.00
IUUC-Dno-028905	Dasypus novemcinctus	79.89	0.00e+00	1455.00
IUUC-Dor-030383	Dipodomys ordii	75.21	0.00e+00	709.00
IUUC-Dse-031297	Dothistroma septosporum	38.11	1.00e-169	590.00
IUUC-Dme-031956	Drosophila melanogaster	42.57	0.00e+00	673.00
IUUC-Ete-032608	Echinops telfairi	73.97	0.00e+00	813.00
IUUC-Eca-034181	Equus caballus	79.78	0.00e+00	1419.00
IUUC-Eeu-034495	Erinaceus europaeus	79.69	0.00e+00	1384.00
IUUC-Fca-035994	Felis catus	81.06	0.00e+00	1366.00
IUUC-Fal-036611	Ficedula albicollis	88.09	0.00e+00	1461.00
IUUC-Fox-037807	Fusarium oxysporum	36.74	4.00e-167	582.00
IUUC-Fso-038090	Fusarium solani	36.65	1.00e-164	573.00
IUUC-Gmo-039018	Gadus morhua	62.01	0.00e+00	672.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.65	1.00e-168	587.00
IUUC-Gac-042334	Gasterosteus aculeatus	59.23	0.00e+00	649.00
IUUC-Gma-043860	Glycine max	39.09	2.00e-174	605.00
IUUC-Ggo-045334	Gorilla gorilla	79.22	0.00e+00	1405.00
IUUC-Hsa-046996	Homo sapiens	80.00	0.00e+00	1408.00
IUUC-Hvu-047381	Hordeum vulgare	35.55	1.00e-89	323.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	79.78	0.00e+00	1427.00
IUUC-Kpa-049185	Komagataella pastoris	34.57	2.00e-153	536.00
IUUC-Lch-050098	Latimeria chalumnae	66.85	0.00e+00	1123.00
IUUC-Lpe-050710	Leersia perrieri	37.83	2.00e-167	582.00
IUUC-Loc-052745	Lepisosteus oculatus	68.43	0.00e+00	1195.00
IUUC-Lma-053104	Leptosphaeria maculans	37.24	7.00e-174	605.00
IUUC-Laf-054395	Loxodonta africana	79.62	0.00e+00	1416.00
IUUC-Mcc-055077	Macaca mulatta	80.32	0.00e+00	1431.00
IUUC-Meu-056418	Macropus eugenii	77.68	0.00e+00	694.00
IUUC-Mor-057031	Magnaporthe oryzae	37.35	6.00e-153	534.00
IUUC-Mpo-057420	Magnaporthe poae	38.13	1.00e-166	580.00
IUUC-Mtr-057838	Medicago truncatula	38.70	0.00e+00	637.00
IUUC-Mla-058854	Melampsora laricipopulina	36.52	4.00e-158	551.00
IUUC-Mga-060120	Meleagris gallopavo	92.04	0.00e+00	1473.00
IUUC-Mvi-060407	Microbotryum violaceum	44.94	6.00e-141	494.00
IUUC-Mmr-060635	Microcebus murinus	79.00	0.00e+00	1431.00
IUUC-Mdo-063023	Monodelphis domestica	79.89	0.00e+00	1462.00
IUUC-Mmu-064103	Mus musculus	76.34	0.00e+00	1417.00
IUUC-Mac-065569	Musa acuminata	38.85	9.00e-174	603.00
IUUC-Mpu-066462	Mustela putorius furo	80.84	0.00e+00	1465.00
IUUC-Mlu-067894	Myotis lucifugus	80.00	0.00e+00	1460.00
IUUC-Nfi-068321	Neosartorya fischeri	38.64	3.00e-177	615.00
IUUC-Ncr-068661	Neurospora crassa	37.45	4.00e-171	595.00
IUUC-Nle-069409	Nomascus leucogenys	80.22	0.00e+00	1414.00
IUUC-Opr-070445	Ochotona princeps	78.30	0.00e+00	894.00
IUUC-Ont-072339	Oreochromis niloticus	68.91	0.00e+00	1224.00
IUUC-Oan-073688	Ornithorhynchus anatinus	74.40	0.00e+00	1322.00
IUUC-Ocu-074227	Oryctolagus cuniculus	80.15	0.00e+00	1468.00
IUUC-Oba-075635	Oryza barthii	38.24	7.00e-163	567.00
IUUC-Obr-076897	Oryza brachyantha	39.39	1.00e-174	606.00
IUUC-Ogl-077555	Oryza glaberrima	38.13	2.00e-162	566.00
IUUC-Ogu-078724	Oryza glumaepatula	38.34	3.00e-164	572.00
IUUC-Oin-080030	Oryza indica	38.34	3.00e-163	568.00
IUUC-Olo-080687	Oryza longistaminata	36.43	3.00e-151	529.00
IUUC-Ome-081867	Oryza meridionalis	38.55	3.00e-164	572.00
IUUC-Oni-082559	Oryza nivara	38.34	8.00e-163	567.00
IUUC-Opu-083332	Oryza punctata	39.44	8.00e-155	540.00
IUUC-Oru-084455	Oryza rufipogon	38.34	3.00e-163	569.00
IUUC-Osa-085793	Oryza sativa	38.34	3.00e-163	569.00
IUUC-Ola-087395	Oryzias latipes	68.72	0.00e+00	1154.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.41	1.00e-160	560.00
IUUC-Oga-088574	Otolemur garnettii	80.32	0.00e+00	1452.00
IUUC-Oar-089453	Ovis aries	78.81	0.00e+00	1451.00
IUUC-Ptr-090694	Pan troglodytes	80.15	0.00e+00	1404.00
IUUC-Pan-092420	Papio anubis	80.04	0.00e+00	1424.00
IUUC-Psi-093683	Pelodiscus sinensis	85.54	0.00e+00	1531.00
IUUC-Pma-094197	Petromyzon marinus	60.53	2.00e-72	265.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.53	1.00e-167	583.00
IUUC-Ppa-095208	Physcomitrella patens	39.68	1.00e-176	613.00
IUUC-Pfo-096299	Poecilia formosa	69.04	0.00e+00	1238.00
IUUC-Pab-098706	Pongo abelii	80.19	0.00e+00	1410.00
IUUC-Pop-099275	Populus trichocarpa	40.23	7.00e-179	620.00
IUUC-Pca-100796	Procavia capensis	66.71	0.00e+00	1063.00
IUUC-Ppe-101861	Prunus persica	40.25	4.00e-180	624.00
IUUC-Pva-103241	Pteropus vampyrus	75.35	0.00e+00	1303.00
IUUC-Pgr-103432	Puccinia graminis	43.88	6.00e-129	454.00
IUUC-Ptt-103742	Puccinia triticina	41.33	2.00e-114	406.00
IUUC-Pte-104069	Pyrenophora teres	37.06	7.00e-162	564.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.53	2.00e-168	586.00
IUUC-Rno-105219	Rattus norvegicus	76.96	0.00e+00	1364.00
IUUC-Sce-106271	Saccharomyces cerevisiae	35.58	2.00e-157	549.00
IUUC-Sha-107550	Sarcophilus harrisii	79.96	0.00e+00	1462.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	39.08	3.00e-166	578.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.89	1.00e-172	600.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	37.10	2.00e-168	585.00
IUUC-Smo-108974	Selaginella moellendorffii	39.98	1.00e-173	603.00
IUUC-Sit-110000	Setaria italica	40.19	4.00e-165	575.00
IUUC-Sly-111595	Solanum lycopersicum	39.92	6.00e-178	617.00
IUUC-Stu-112516	Solanum tuberosum	39.89	7.00e-178	617.00
IUUC-Sar-113195	Sorex araneus	74.45	0.00e+00	1172.00
IUUC-Sbi-114465	Sorghum bicolor	37.92	3.00e-170	592.00
IUUC-Sre-115006	Sporisorium reilianum	36.03	2.00e-155	543.00
IUUC-Ssc-115929	Sus scrofa	80.48	0.00e+00	1420.00
IUUC-Tgu-117282	Taeniopygia guttata	88.19	0.00e+00	1456.00
IUUC-Tru-118406	Takifugu rubripes	66.41	0.00e+00	1174.00
IUUC-Tsy-119170	Tarsius syrichta	78.90	0.00e+00	1428.00
IUUC-Tni-119721	Tetraodon nigroviridis	65.19	0.00e+00	1146.00
IUUC-Tca-121761	Theobroma cacao	40.53	0.00e+00	642.00
IUUC-Tre-121908	Trichoderma reesei	36.70	2.00e-165	576.00
IUUC-Tvi-122547	Trichoderma virens	37.51	6.00e-169	587.00
IUUC-Tae-125496	Triticum aestivum	38.82	6.00e-165	574.00
IUUC-Tur-126811	Triticum urartu	40.26	1.00e-165	576.00
IUUC-Tme-126987	Tuber melanosporum	39.92	3.00e-180	625.00
IUUC-Tbe-127315	Tupaia belangeri	84.85	0.00e+00	804.00
IUUC-Ttr-129165	Tursiops truncatus	72.22	0.00e+00	1222.00
IUUC-Uma-129651	Ustilago maydis	35.15	4.00e-151	528.00
IUUC-Vda-129973	Verticillium dahliae	37.10	1.00e-160	560.00
IUUC-Vpa-130163	Vicugna pacos	70.07	9.00e-173	600.00
IUUC-Vvi-131402	Vitis vinifera	40.17	0.00e+00	630.00
IUUC-Xtr-132296	Xenopus tropicalis	73.30	0.00e+00	1299.00
IUUC-Xma-133028	Xiphophorus maculatus	69.44	0.00e+00	1245.00
IUUC-Yli-134484	Yarrowia lipolytica	38.56	5.00e-156	544.00
IUUC-Zma-135938	Zea mays	37.04	8.00e-169	587.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence