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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108239
UUCD1 version UUC-ScP-00157
Ensembl Protein ID SPBC3D6.12.1:pep
UniProt Accession P87177; YB1C_SCHPO
Genbank Protein ID CAB09121.1
Protein Name Uncharacterized WD repeat-containing protein C3D6.12
Genbank Nucleotide ID CU329671
Gene Name dip2; SPBC3D6.12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC3D6.12 SPBC3D6.12.1 SPBC3D6.12.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexMentha
Post-translational Modifications (PTMs)
dbPAFdbPTMUniProt
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.10e-39 129.9 574 613
UBD/Beta-Prp 2.00e-83 278.1 535 688
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v +++   d +llv++s D+++k+W l+ g++ ks
   Q: 574  GHKLPVLSMDIsYDsKLLVTCSADKNVKIWGLDFGDCHKS 613
           788899998888455*********************9875 PP
   

   UBD/Beta-Prp
   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           ++v+  vk+spd++++a++  d+t+kv+ +++ k++  l+gh+ +v ++++s d+k+lvt+s D+++k+w l+ g+c  ++ +h+ds++ ++f
   Q: 535  DDVLA-VKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTF 626
           44555.999************************************************************************************ PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           +p+++ + + s+dr +r wd ++   +   l+gh++ v+ ++v p    +vsGs D  +rlW   +g
   Q: 627  QPDTYNFFTCSKDREVRYWDGKSFDLIL-KLRGHHSEVWALAVGP--TFVVSGSHDHSIRLWE--QG 688
           ***************************9.9***************..9**************5..44 PP
   
Organism Schizosaccharomyces pombe
Protein Sequence
(Fasta)
MVKSYTRYEP TEFFGVIASS GCNILGQPSS SAKSVGRAIV GGLESVLEWD LKTGQLLSKW 60
KDSDCSAKVT CIANFDEMYA VGYADGSIRL WKDGELLITL NGHKSAVTTM DFDKMGTRLA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108239|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTAGAGGAGT GTATATACTT AGCATCAACC AACGCCTTTT TTTTAATCTA GGTCTGGGTA 60
GACGCAATGG TCAAAAGCTA TACGCGGTAC GAACCAACCG AATTTTTTGG TGTCATTGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108239|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG spo:SPBC3D6.12
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000784 Aegilops tauschii 33.48 5.00e-130 456.00
IUUC-Aml-001245 Ailuropoda melanoleuca 37.76 1.00e-163 568.00
IUUC-Atr-002700 Amborella trichopoda 33.54 1.00e-141 495.00
IUUC-Apl-004164 Anas platyrhynchos 37.72 5.00e-131 459.00
IUUC-Aca-004765 Anolis carolinensis 36.70 5.00e-160 556.00
IUUC-Aly-006503 Arabidopsis lyrata 33.74 4.00e-146 510.00
IUUC-Ath-006848 Arabidopsis thaliana 33.67 5.00e-149 520.00
IUUC-Ago-007909 Ashbya gossypii 42.20 0.00e+00 692.00
IUUC-Acl-008238 Aspergillus clavatus 43.51 0.00e+00 780.00
IUUC-Afl-008544 Aspergillus flavus 42.45 0.00e+00 750.00
IUUC-Afu-008868 Aspergillus fumigatus 43.55 0.00e+00 767.00
IUUC-Ani-009367 Aspergillus nidulans 42.43 0.00e+00 745.00
IUUC-Ang-009732 Aspergillus niger 42.94 0.00e+00 778.00
IUUC-Aor-010140 Aspergillus oryzae 42.77 0.00e+00 757.00
IUUC-Ate-010572 Aspergillus terreus 41.86 0.00e+00 732.00
IUUC-Ame-010956 Astyanax mexicanus 35.25 1.00e-149 521.00
IUUC-Bgr-012296 Blumeria graminis 42.74 0.00e+00 767.00
IUUC-Bta-012716 Bos taurus 38.30 5.00e-169 586.00
IUUC-Bci-013699 Botrytis cinerea 44.52 0.00e+00 744.00
IUUC-Bdi-014525 Brachypodium distachyon 33.82 2.00e-143 501.00
IUUC-Bol-015117 Brassica oleracea 35.22 8.00e-150 522.00
IUUC-Bra-016869 Brassica rapa 35.41 5.00e-149 520.00
IUUC-Cel-018570 Caenorhabditis elegans 27.58 2.00e-93 335.00
IUUC-Cja-019425 Callithrix jacchus 37.70 4.00e-167 580.00
IUUC-Cfa-020787 Canis familiaris 38.28 2.00e-166 578.00
IUUC-Cpo-021729 Cavia porcellus 40.70 3.00e-130 457.00
IUUC-Cre-022678 Chlamydomonas reinhardtii 38.83 5.00e-88 317.00
IUUC-Csa-024098 Chlorocebus sabaeus 38.32 4.00e-170 590.00
IUUC-Cho-024495 Choloepus hoffmanni 39.25 2.00e-88 318.00
IUUC-Cin-025245 Ciona intestinalis 31.84 9.00e-91 325.00
IUUC-Cgl-026708 Colletotrichum gloeosporioides 44.29 0.00e+00 738.00
IUUC-Cne-026835 Cryptococcus neoformans 47.56 1.00e-126 445.00
IUUC-Cme-027162 Cyanidioschyzon merolae 26.16 2.00e-35 143.00
IUUC-Dre-027874 Danio rerio 35.99 8.00e-162 562.00
IUUC-Dno-028905 Dasypus novemcinctus 38.22 8.00e-167 578.00
IUUC-Dor-030383 Dipodomys ordii 32.10 6.00e-67 247.00
IUUC-Dse-031297 Dothistroma septosporum 41.43 0.00e+00 724.00
IUUC-Dme-031956 Drosophila melanogaster 31.63 2.00e-118 417.00
IUUC-Ete-032608 Echinops telfairi 33.46 5.00e-88 316.00
IUUC-Eca-034181 Equus caballus 37.57 3.00e-163 567.00
IUUC-Eeu-034495 Erinaceus europaeus 36.97 1.00e-157 548.00
IUUC-Fca-035994 Felis catus 38.37 8.00e-159 552.00
IUUC-Fal-036611 Ficedula albicollis 36.71 2.00e-159 554.00
IUUC-Fox-037807 Fusarium oxysporum 43.71 0.00e+00 754.00
IUUC-Fso-038090 Fusarium solani 45.23 0.00e+00 744.00
IUUC-Gmo-039018 Gadus morhua 31.99 4.00e-84 303.00
IUUC-Ggr-039748 Gaeumannomyces graminis 46.24 0.00e+00 793.00
IUUC-Gga-040707 Gallus gallus 37.58 2.00e-159 554.00
IUUC-Gac-042334 Gasterosteus aculeatus 30.69 4.00e-73 267.00
IUUC-Gma-043033 Glycine max 34.60 5.00e-146 509.00
IUUC-Ggo-045334 Gorilla gorilla 38.53 2.00e-167 581.00
IUUC-Hsa-046996 Homo sapiens 38.49 9.00e-167 578.00
IUUC-Hvu-047381 Hordeum vulgare 31.63 2.00e-78 284.00
IUUC-Itr-047938 Ictidomys tridecemlineatus 36.82 5.00e-160 556.00
IUUC-Kpa-049185 Komagataella pastoris 40.90 0.00e+00 663.00
IUUC-Lch-050098 Latimeria chalumnae 35.17 4.00e-142 496.00
IUUC-Lpe-050710 Leersia perrieri 34.40 1.00e-140 491.00
IUUC-Loc-052745 Lepisosteus oculatus 35.31 5.00e-151 526.00
IUUC-Lma-053104 Leptosphaeria maculans 43.09 0.00e+00 750.00
IUUC-Laf-054395 Loxodonta africana 38.60 1.00e-166 578.00
IUUC-Mcc-055077 Macaca mulatta 38.43 1.00e-168 585.00
IUUC-Meu-056418 Macropus eugenii 40.63 2.00e-83 302.00
IUUC-Mor-057031 Magnaporthe oryzae 44.86 0.00e+00 697.00
IUUC-Mpo-057420 Magnaporthe poae 45.94 0.00e+00 771.00
IUUC-Mtr-057838 Medicago truncatula 35.02 6.00e-149 519.00
IUUC-Mla-058854 Melampsora laricipopulina 37.68 2.00e-162 564.00
IUUC-Mga-060120 Meleagris gallopavo 40.03 9.00e-121 426.00
IUUC-Mvi-060407 Microbotryum violaceum 45.42 3.00e-139 487.00
IUUC-Mmr-060635 Microcebus murinus 38.19 7.00e-165 572.00
IUUC-Mdo-063023 Monodelphis domestica 36.90 4.00e-163 566.00
IUUC-Mmu-064103 Mus musculus 37.89 4.00e-169 586.00
IUUC-Mac-065569 Musa acuminata 34.52 5.00e-152 529.00
IUUC-Mpu-066462 Mustela putorius furo 38.12 2.00e-165 574.00
IUUC-Mlu-067894 Myotis lucifugus 37.41 3.00e-164 570.00
IUUC-Nfi-068321 Neosartorya fischeri 43.31 0.00e+00 760.00
IUUC-Ncr-068661 Neurospora crassa 43.31 0.00e+00 759.00
IUUC-Nle-069409 Nomascus leucogenys 38.43 4.00e-169 586.00
IUUC-Opr-070445 Ochotona princeps 41.30 4.00e-112 397.00
IUUC-Ont-072339 Oreochromis niloticus 36.10 9.00e-156 542.00
IUUC-Oan-073688 Ornithorhynchus anatinus 34.66 3.00e-145 507.00
IUUC-Ocu-074227 Oryctolagus cuniculus 37.87 7.00e-166 575.00
IUUC-Oba-075635 Oryza barthii 33.92 2.00e-133 468.00
IUUC-Obr-076897 Oryza brachyantha 35.38 1.00e-150 525.00
IUUC-Ogl-077555 Oryza glaberrima 33.82 4.00e-133 466.00
IUUC-Ogu-078724 Oryza glumaepatula 34.13 2.00e-135 474.00
IUUC-Oin-080030 Oryza indica 34.03 4.00e-134 470.00
IUUC-Olo-080687 Oryza longistaminata 32.20 7.00e-123 433.00
IUUC-Ome-081867 Oryza meridionalis 33.92 3.00e-134 470.00
IUUC-Oni-082559 Oryza nivara 34.03 6.00e-134 469.00
IUUC-Opu-083332 Oryza punctata 35.63 4.00e-126 443.00
IUUC-Oru-084455 Oryza rufipogon 33.92 9.00e-134 469.00
IUUC-Osa-085793 Oryza sativa 33.92 9.00e-134 469.00
IUUC-Ola-087395 Oryzias latipes 35.32 6.00e-150 523.00
IUUC-Olu-087768 Ostreococcus lucimarinus 33.83 3.00e-129 454.00
IUUC-Oga-088574 Otolemur garnettii 36.92 4.00e-162 563.00
IUUC-Oar-089453 Ovis aries 37.81 6.00e-168 582.00
IUUC-Ptr-090694 Pan troglodytes 38.32 8.00e-167 578.00
IUUC-Pan-092420 Papio anubis 38.32 1.00e-168 585.00
IUUC-Psi-093683 Pelodiscus sinensis 36.99 2.00e-156 544.00
IUUC-Pma-094197 Petromyzon marinus 33.07 5.00e-31 125.00
IUUC-Pno-094783 Phaeosphaeria nodorum 42.68 0.00e+00 726.00
IUUC-Ppa-095208 Physcomitrella patens 33.91 2.00e-143 501.00
IUUC-Pfo-096299 Poecilia formosa 36.04 9.00e-165 572.00
IUUC-Pab-098706 Pongo abelii 38.78 7.00e-169 585.00
IUUC-Pop-099275 Populus trichocarpa 35.46 8.00e-144 502.00
IUUC-Pca-100796 Procavia capensis 30.80 1.00e-93 335.00
IUUC-Ppe-101861 Prunus persica 35.44 6.00e-147 513.00
IUUC-Pva-103241 Pteropus vampyrus 36.57 3.00e-154 537.00
IUUC-Pgr-103432 Puccinia graminis 37.58 2.00e-163 567.00
IUUC-Ptt-103742 Puccinia triticina 34.18 3.00e-142 497.00
IUUC-Pte-104069 Pyrenophora teres 41.98 0.00e+00 709.00
IUUC-Pyt-104650 Pyrenophora triticirepentis 41.57 0.00e+00 730.00
IUUC-Rno-105219 Rattus norvegicus 37.88 8.00e-165 572.00
IUUC-Sce-106271 Saccharomyces cerevisiae 40.20 0.00e+00 677.00
IUUC-Sha-107550 Sarcophilus harrisii 37.41 1.00e-161 561.00
IUUC-Sja-107664 Schizosaccharomyces japonicus 65.62 0.00e+00 1232.00
IUUC-Ssl-108626 Sclerotinia sclerotiorum 44.27 0.00e+00 771.00
IUUC-Smo-109477 Selaginella moellendorffii 35.12 1.00e-149 521.00
IUUC-Sit-110000 Setaria italica 35.14 2.00e-136 478.00
IUUC-Sly-111595 Solanum lycopersicum 36.58 2.00e-154 537.00
IUUC-Stu-112516 Solanum tuberosum 35.94 2.00e-152 531.00
IUUC-Sar-113195 Sorex araneus 42.91 8.00e-108 382.00
IUUC-Sbi-114465 Sorghum bicolor 35.14 4.00e-148 516.00
IUUC-Sre-115006 Sporisorium reilianum 36.61 2.00e-166 578.00
IUUC-Ssc-115929 Sus scrofa 37.13 4.00e-162 563.00
IUUC-Tgu-117282 Taeniopygia guttata 34.99 6.00e-155 539.00
IUUC-Tru-118406 Takifugu rubripes 35.93 4.00e-155 540.00
IUUC-Tsy-119170 Tarsius syrichta 36.01 1.00e-156 545.00
IUUC-Tni-119721 Tetraodon nigroviridis 34.78 2.00e-151 527.00
IUUC-Tca-121761 Theobroma cacao 35.71 3.00e-154 537.00
IUUC-Tre-121908 Trichoderma reesei 44.47 0.00e+00 724.00
IUUC-Tvi-122547 Trichoderma virens 43.93 0.00e+00 721.00
IUUC-Tae-125433 Triticum aestivum 35.07 5.00e-142 496.00
IUUC-Tur-126811 Triticum urartu 36.08 3.00e-141 494.00
IUUC-Tme-126987 Tuber melanosporum 44.54 0.00e+00 797.00
IUUC-Tbe-127315 Tupaia belangeri 42.19 8.00e-93 333.00
IUUC-Ttr-129165 Tursiops truncatus 32.12 1.00e-115 409.00
IUUC-Uma-129651 Ustilago maydis 36.92 7.00e-170 589.00
IUUC-Vda-129973 Verticillium dahliae 45.05 0.00e+00 744.00
IUUC-Vpa-130163 Vicugna pacos 31.94 2.00e-63 235.00
IUUC-Vvi-131402 Vitis vinifera 34.54 1.00e-152 531.00
IUUC-Xtr-132296 Xenopus tropicalis 37.00 9.00e-161 558.00
IUUC-Xma-133028 Xiphophorus maculatus 36.31 3.00e-163 567.00
IUUC-Yli-134484 Yarrowia lipolytica 41.56 0.00e+00 697.00
IUUC-Zma-135938 Zea mays 34.17 3.00e-147 513.00
Created Date 25-Jun-2017

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