iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ago-007958

Ensembl Protein ID

AAS50872

UniProt Accession

Q75DC5; ERB1_ASHGO

Genbank Protein ID

AAS50872.2

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

AE016815

Gene Name

ERB1; ABR101C; AGOS_ABR101C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AGOS_ABR101C	AAS50872	AAS50872

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-14	49.8	461	497

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++++ l+  ++   l++GsdDgt++vW++ tg+ 
   Q: 461  GHKGKIRTLSIdPSgLWLATGSDDGTVRVWEILTGRE 497
           8**********9665789*************999886 PP

Organism

Ashbya gossypii

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MVHSKKDKSV MKHSDIKKRG AAVLEEEDVL QQDEQLLVDG ATIDCDSDDD EEFQSAEEEV 60
LSSGSESSSK EGSTPGSPVE GSDEEAEDED ADEEEDEDAE FNRLLAAEEG DSEGEYGSED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTCACA GTAAGAAGGA TAAATCTGTG ATGAAACACA GTGATATCAA GAAACGGGGG 60
GCAGCCGTGC TTGAGGAGGA AGATGTTCTG CAACAAGACG AACAACTGCT CGTCGATGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ago:AGOS_ABR101C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	37.04	3.00e-107	380.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.69	2.00e-139	487.00
IUUC-Atr-003141	Amborella trichopoda	36.09	2.00e-72	264.00
IUUC-Apl-003545	Anas platyrhynchos	45.31	4.00e-75	273.00
IUUC-Aly-005649	Arabidopsis lyrata	41.54	4.00e-138	483.00
IUUC-Ath-007625	Arabidopsis thaliana	41.23	2.00e-130	457.00
IUUC-Acl-008344	Aspergillus clavatus	55.10	0.00e+00	703.00
IUUC-Afl-008616	Aspergillus flavus	55.81	0.00e+00	728.00
IUUC-Afu-009083	Aspergillus fumigatus	55.54	0.00e+00	692.00
IUUC-Ani-009365	Aspergillus nidulans	54.23	0.00e+00	713.00
IUUC-Ang-009796	Aspergillus niger	55.25	0.00e+00	714.00
IUUC-Aor-010015	Aspergillus oryzae	55.81	0.00e+00	728.00
IUUC-Ate-010537	Aspergillus terreus	55.25	0.00e+00	724.00
IUUC-Ame-011767	Astyanax mexicanus	46.12	7.00e-71	258.00
IUUC-Bgr-012286	Blumeria graminis	54.38	0.00e+00	735.00
IUUC-Bta-013569	Bos taurus	43.08	3.00e-149	520.00
IUUC-Bci-013820	Botrytis cinerea	55.49	0.00e+00	704.00
IUUC-Bdi-014477	Brachypodium distachyon	40.15	3.00e-133	466.00
IUUC-Bol-016099	Brassica oleracea	40.25	2.00e-135	474.00
IUUC-Bra-017174	Brassica rapa	40.15	6.00e-136	476.00
IUUC-Cel-018201	Caenorhabditis elegans	39.57	3.00e-121	426.00
IUUC-Cja-019009	Callithrix jacchus	44.96	5.00e-89	319.00
IUUC-Cfa-020173	Canis familiaris	40.94	1.00e-140	491.00
IUUC-Cpo-021796	Cavia porcellus	43.54	6.00e-151	525.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	39.61	6.00e-129	452.00
IUUC-Csa-023440	Chlorocebus sabaeus	43.08	9.00e-155	538.00
IUUC-Cin-025782	Ciona intestinalis	42.27	2.00e-155	540.00
IUUC-Csv-026352	Ciona savignyi	42.23	3.00e-150	523.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	48.96	4.00e-169	585.00
IUUC-Cne-027004	Cryptococcus neoformans	45.33	0.00e+00	653.00
IUUC-Cme-027242	Cyanidioschyzon merolae	37.09	4.00e-125	439.00
IUUC-Dre-028658	Danio rerio	43.29	6.00e-158	548.00
IUUC-Dno-028883	Dasypus novemcinctus	43.64	5.00e-151	526.00
IUUC-Dor-031031	Dipodomys ordii	42.90	2.00e-153	533.00
IUUC-Dse-031443	Dothistroma septosporum	50.51	0.00e+00	685.00
IUUC-Dme-031786	Drosophila melanogaster	43.06	2.00e-160	557.00
IUUC-Eca-033677	Equus caballus	43.08	7.00e-150	521.00
IUUC-Eeu-035310	Erinaceus europaeus	39.89	3.00e-113	399.00
IUUC-Fca-035888	Felis catus	42.18	3.00e-150	523.00
IUUC-Fal-037438	Ficedula albicollis	41.75	1.00e-123	434.00
IUUC-Fox-037973	Fusarium oxysporum	51.48	0.00e+00	718.00
IUUC-Fso-038187	Fusarium solani	51.48	0.00e+00	720.00
IUUC-Gmo-039114	Gadus morhua	41.28	3.00e-141	493.00
IUUC-Ggr-039746	Gaeumannomyces graminis	51.70	0.00e+00	723.00
IUUC-Gga-040631	Gallus gallus	42.55	4.00e-91	325.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.38	3.00e-147	513.00
IUUC-Gma-044215	Glycine max	39.82	3.00e-135	473.00
IUUC-Ggo-045587	Gorilla gorilla	43.08	5.00e-154	535.00
IUUC-Hsa-046319	Homo sapiens	43.08	3.00e-154	536.00
IUUC-Hvu-047526	Hordeum vulgare	39.69	7.00e-127	445.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.77	4.00e-150	522.00
IUUC-Kpa-049221	Komagataella pastoris	62.32	0.00e+00	936.00
IUUC-Lch-049640	Latimeria chalumnae	44.41	2.00e-166	577.00
IUUC-Lpe-051135	Leersia perrieri	40.87	1.00e-68	252.00
IUUC-Loc-051930	Lepisosteus oculatus	44.15	1.00e-166	577.00
IUUC-Lma-053290	Leptosphaeria maculans	51.99	0.00e+00	689.00
IUUC-Laf-053903	Loxodonta africana	39.26	4.00e-124	436.00
IUUC-Mcc-055471	Macaca mulatta	43.08	6.00e-154	535.00
IUUC-Meu-056190	Macropus eugenii	43.85	8.00e-154	535.00
IUUC-Mor-057135	Magnaporthe oryzae	51.48	0.00e+00	688.00
IUUC-Mpo-057475	Magnaporthe poae	48.62	0.00e+00	676.00
IUUC-Mtr-058689	Medicago truncatula	37.75	4.00e-121	426.00
IUUC-Mla-059149	Melampsora laricipopulina	48.61	0.00e+00	645.00
IUUC-Mga-059645	Meleagris gallopavo	35.16	2.00e-49	186.00
IUUC-Mvi-060485	Microbotryum violaceum	46.16	4.00e-167	580.00
IUUC-Mmr-061674	Microcebus murinus	42.62	3.00e-147	513.00
IUUC-Mdo-062973	Monodelphis domestica	43.08	3.00e-158	550.00
IUUC-Mmu-064180	Mus musculus	42.77	4.00e-151	526.00
IUUC-Mac-064535	Musa acuminata	38.09	2.00e-83	301.00
IUUC-Mpu-066406	Mustela putorius furo	42.77	4.00e-154	536.00
IUUC-Mlu-067795	Myotis lucifugus	43.47	2.00e-144	503.00
IUUC-Nfi-068516	Neosartorya fischeri	54.12	0.00e+00	657.00
IUUC-Ncr-068767	Neurospora crassa	53.06	0.00e+00	670.00
IUUC-Opr-071084	Ochotona princeps	44.13	2.00e-55	207.00
IUUC-Ont-071614	Oreochromis niloticus	43.32	4.00e-161	559.00
IUUC-Oba-075980	Oryza barthii	41.16	1.00e-69	255.00
IUUC-Obr-076799	Oryza brachyantha	40.00	8.00e-132	461.00
IUUC-Ogl-077134	Oryza glaberrima	39.69	2.00e-125	441.00
IUUC-Ogu-078655	Oryza glumaepatula	38.15	8.00e-120	422.00
IUUC-Oin-079654	Oryza indica	39.69	3.00e-125	440.00
IUUC-Olo-080706	Oryza longistaminata	41.45	2.00e-69	254.00
IUUC-Ome-081716	Oryza meridionalis	41.45	2.00e-69	254.00
IUUC-Oni-082508	Oryza nivara	37.85	2.00e-118	417.00
IUUC-Opu-083707	Oryza punctata	41.45	3.00e-69	254.00
IUUC-Oru-084453	Oryza rufipogon	41.45	2.00e-69	254.00
IUUC-Osa-085811	Oryza sativa	39.54	3.00e-125	440.00
IUUC-Ola-087361	Oryzias latipes	43.81	4.00e-160	556.00
IUUC-Oga-088015	Otolemur garnettii	42.73	7.00e-156	541.00
IUUC-Oar-090058	Ovis aries	50.30	2.00e-50	191.00
IUUC-Ptr-090631	Pan troglodytes	41.53	2.00e-58	217.00
IUUC-Pan-092306	Papio anubis	42.86	1.00e-152	531.00
IUUC-Pma-094622	Petromyzon marinus	43.01	5.00e-165	572.00
IUUC-Pno-094794	Phaeosphaeria nodorum	49.03	0.00e+00	658.00
IUUC-Ppa-095528	Physcomitrella patens	37.91	1.00e-82	298.00
IUUC-Pfo-096682	Poecilia formosa	42.45	1.00e-162	564.00
IUUC-Pab-097939	Pongo abelii	43.05	7.00e-140	488.00
IUUC-Pop-099530	Populus trichocarpa	42.61	3.00e-127	446.00
IUUC-Pca-100333	Procavia capensis	42.31	3.00e-149	520.00
IUUC-Ppe-102078	Prunus persica	39.26	9.00e-131	458.00
IUUC-Pgr-103525	Puccinia graminis	47.55	1.00e-171	594.00
IUUC-Ptt-103929	Puccinia triticina	47.95	3.00e-166	577.00
IUUC-Pte-104029	Pyrenophora teres	52.52	0.00e+00	737.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	52.23	0.00e+00	736.00
IUUC-Rno-105248	Rattus norvegicus	43.97	1.00e-154	538.00
IUUC-Sce-106381	Saccharomyces cerevisiae	79.32	0.00e+00	1177.00
IUUC-Sha-106519	Sarcophilus harrisii	43.54	4.00e-159	552.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	47.61	7.00e-178	615.00
IUUC-Spo-108071	Schizosaccharomyces pombe	44.20	2.00e-167	580.00
IUUC-Smo-109604	Selaginella moellendorffii	39.88	2.00e-126	444.00
IUUC-Sit-110551	Setaria italica	40.31	2.00e-127	447.00
IUUC-Sly-110970	Solanum lycopersicum	41.36	5.00e-72	262.00
IUUC-Stu-112593	Solanum tuberosum	40.31	8.00e-137	478.00
IUUC-Sar-113123	Sorex araneus	47.46	4.00e-65	239.00
IUUC-Sbi-113945	Sorghum bicolor	39.45	1.00e-130	457.00
IUUC-Sre-115188	Sporisorium reilianum	44.26	2.00e-165	573.00
IUUC-Ssc-115352	Sus scrofa	42.92	1.00e-153	534.00
IUUC-Tru-117685	Takifugu rubripes	43.85	5.00e-165	572.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.63	9.00e-157	544.00
IUUC-Tca-121664	Theobroma cacao	39.76	2.00e-137	480.00
IUUC-Tre-122229	Trichoderma reesei	51.78	0.00e+00	654.00
IUUC-Tvi-122576	Trichoderma virens	51.41	0.00e+00	654.00
IUUC-Tae-124110	Triticum aestivum	39.94	3.00e-119	420.00
IUUC-Tur-126781	Triticum urartu	37.36	4.00e-103	366.00
IUUC-Tme-127080	Tuber melanosporum	60.54	0.00e+00	842.00
IUUC-Ttr-128514	Tursiops truncatus	39.53	1.00e-90	325.00
IUUC-Uma-129556	Ustilago maydis	43.93	1.00e-161	561.00
IUUC-Vda-129715	Verticillium dahliae	53.40	0.00e+00	710.00
IUUC-Vvi-131211	Vitis vinifera	39.22	6.00e-128	449.00
IUUC-Xma-133883	Xiphophorus maculatus	42.75	2.00e-157	547.00
IUUC-Yli-134438	Yarrowia lipolytica	63.20	0.00e+00	856.00
IUUC-Zma-135341	Zea mays	35.17	1.00e-116	411.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence