iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108142

UUCD1 version

UUC-ScP-00056

Ensembl Protein ID

SPCC5E4.03c.1:pep

UniProt Accession

O13282; TAF5_SCHPO

Genbank Protein ID

BAA22162.1; CAA21958.1

Protein Name

Transcription initiation factor TFIID subunit 5; Transcription initiation factor TFIID 72 kDa subunit

Genbank Nucleotide ID

AB001372; CU329672

Gene Name

taf5; taf72; SPCC5E4.03c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC5E4.03c	SPCC5E4.03c.1	SPCC5E4.03c.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-37	121.5	461	499
UBD/Beta-Prp	6.80e-65	217.2	320	589

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+ f ++  ++++Gs D+t+++WD+++g++++
   Q: 461  GHLSDVDCVTFhPNsAYVLTGSSDKTCRLWDVHRGHSVR 499
           8***********7779*****************998875 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstg 84
           ++h  + ++c  fspd++++a g++ + i++w+++  k+               +l +h+++v+ ++fspd k+l+++seD+ +++w+++t 
   Q: 320  FHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKslpkstsvedsdgSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTK 411
           578888999*************************9999999*************************************************** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           + ++++kgh+  v++++f p g++++++shd+t+++w  ++ + l+ +++gh + v cv++hp++ ++ +Gs D+t+rlWd+ +g  +r + 
   Q: 412  TALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLR-VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN 502
           **********************************************.********************************************* PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           g ht++v+ +++ ++g  ++s++  g + lwd+ tg+ ++t++gh+ n++s+ fs++++ lvsg+sD ++r Wd+ + ++++ ++ + 
   Q: 503  G-HTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSL 589
           9.*************************************************************************9999998877755 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

TAFs are components of the transcription factor IID (TFIID) complex that are essential for mediating regulation of RNA polymerase transcription. Regulates the genes involved in ubiquitin-dependent proteolysis during the progression of M-phase of mitosis.

Protein Sequence
(Fasta)

MSATNGPQPQ DLNRIVLDYL AKKGYSRTEA MLRLEASGSG VSVEEKLKSI EETPDAYTHT 60
YTILRDWVDS SLELYKAELH RILFPIFVHS YLNLLSQDHY EAAKQFYELF KDDHTDLHDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCTAGCA AGTTGCTTTG AGCTCTGCGC AGGTAATTAT ATGAATCACG GTCATTTGTA 60
GATTTATATT TGGATTCTAA TTAATTTCTT CAAGCTAGAG TATTGGAGAA TTTAACCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0000124--C:SAGA complex
GO:0005669--C:transcription factor TFIID complex
GO:0006338--P:chromatin remodeling
GO:0016573--P:histone acetylation
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

KEGG

spo:SPCC5E4.03c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	30.33	2.00e-82	298.00
IUUC-Aml-001607	Ailuropoda melanoleuca	36.02	2.00e-107	381.00
IUUC-Atr-003136	Amborella trichopoda	33.58	2.00e-109	387.00
IUUC-Apl-004193	Anas platyrhynchos	36.51	7.00e-110	389.00
IUUC-Aca-004522	Anolis carolinensis	35.20	2.00e-106	378.00
IUUC-Aly-006476	Arabidopsis lyrata	35.47	3.00e-104	370.00
IUUC-Ath-006587	Arabidopsis thaliana	34.90	5.00e-107	379.00
IUUC-Ago-007736	Ashbya gossypii	51.97	7.00e-116	409.00
IUUC-Acl-008092	Aspergillus clavatus	40.32	4.00e-141	493.00
IUUC-Afl-008659	Aspergillus flavus	41.94	1.00e-142	498.00
IUUC-Afu-008902	Aspergillus fumigatus	40.93	5.00e-140	489.00
IUUC-Ani-009462	Aspergillus nidulans	39.77	1.00e-113	401.00
IUUC-Aor-010083	Aspergillus oryzae	41.94	1.00e-142	498.00
IUUC-Ate-010271	Aspergillus terreus	41.23	2.00e-138	484.00
IUUC-Ame-010721	Astyanax mexicanus	36.45	1.00e-109	388.00
IUUC-Bgr-012257	Blumeria graminis	37.37	2.00e-121	427.00
IUUC-Bta-013539	Bos taurus	36.02	2.00e-107	381.00
IUUC-Bci-013737	Botrytis cinerea	37.77	1.00e-126	444.00
IUUC-Bdi-015041	Brachypodium distachyon	42.65	6.00e-73	266.00
IUUC-Bol-015483	Brassica oleracea	34.65	1.00e-106	378.00
IUUC-Bra-017147	Brassica rapa	35.04	3.00e-107	380.00
IUUC-Cel-018451	Caenorhabditis elegans	26.97	6.00e-57	213.00
IUUC-Cja-018881	Callithrix jacchus	36.02	1.00e-107	382.00
IUUC-Cfa-020056	Canis familiaris	36.02	1.00e-107	382.00
IUUC-Cpo-021454	Cavia porcellus	36.41	2.00e-108	384.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	34.43	2.00e-43	168.00
IUUC-Csa-023045	Chlorocebus sabaeus	36.03	6.00e-107	379.00
IUUC-Cho-024638	Choloepus hoffmanni	39.25	8.00e-74	269.00
IUUC-Cin-025457	Ciona intestinalis	44.98	1.00e-63	233.00
IUUC-Csv-025882	Ciona savignyi	40.40	2.00e-75	275.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	34.65	8.00e-115	405.00
IUUC-Cne-026876	Cryptococcus neoformans	36.54	9.00e-94	336.00
IUUC-Cme-027302	Cyanidioschyzon merolae	37.85	7.00e-69	253.00
IUUC-Dre-027980	Danio rerio	36.13	4.00e-109	386.00
IUUC-Dno-028863	Dasypus novemcinctus	36.18	4.00e-108	383.00
IUUC-Dor-030561	Dipodomys ordii	36.02	1.00e-107	382.00
IUUC-Dse-031547	Dothistroma septosporum	37.88	2.00e-121	427.00
IUUC-Dme-031917	Drosophila melanogaster	40.31	8.00e-74	269.00
IUUC-Ete-032712	Echinops telfairi	39.52	7.00e-72	263.00
IUUC-Eca-033927	Equus caballus	36.12	1.00e-106	379.00
IUUC-Eeu-034449	Erinaceus europaeus	36.96	1.00e-89	322.00
IUUC-Fca-036325	Felis catus	36.02	2.00e-107	381.00
IUUC-Fal-036604	Ficedula albicollis	36.39	3.00e-108	384.00
IUUC-Fox-038049	Fusarium oxysporum	34.96	2.00e-91	328.00
IUUC-Fso-038302	Fusarium solani	36.26	3.00e-105	374.00
IUUC-Gmo-038832	Gadus morhua	37.23	9.00e-109	385.00
IUUC-Ggr-039878	Gaeumannomyces graminis	36.63	4.00e-113	400.00
IUUC-Gga-041147	Gallus gallus	36.68	2.00e-110	391.00
IUUC-Gac-041373	Gasterosteus aculeatus	37.02	2.00e-106	377.00
IUUC-Gma-043230	Glycine max	34.52	3.00e-111	394.00
IUUC-Ggo-044568	Gorilla gorilla	30.00	6.00e-74	269.00
IUUC-Hsa-045971	Homo sapiens	36.02	1.00e-107	382.00
IUUC-Hvu-047695	Hordeum vulgare	42.69	7.00e-74	269.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	36.02	9.00e-108	382.00
IUUC-Kpa-049402	Komagataella pastoris	45.20	7.00e-167	578.00
IUUC-Lch-049526	Latimeria chalumnae	36.02	3.00e-103	367.00
IUUC-Lpe-051560	Leersia perrieri	33.08	1.00e-96	345.00
IUUC-Loc-052882	Lepisosteus oculatus	36.61	5.00e-109	386.00
IUUC-Lma-053212	Leptosphaeria maculans	37.83	8.00e-113	399.00
IUUC-Laf-053859	Loxodonta africana	36.02	1.00e-107	382.00
IUUC-Mcc-054957	Macaca mulatta	36.38	4.00e-91	326.00
IUUC-Meu-056182	Macropus eugenii	38.17	3.00e-71	260.00
IUUC-Mor-057024	Magnaporthe oryzae	36.72	4.00e-107	380.00
IUUC-Mpo-057520	Magnaporthe poae	36.20	3.00e-104	370.00
IUUC-Mtr-058754	Medicago truncatula	34.71	2.00e-111	394.00
IUUC-Mla-058881	Melampsora laricipopulina	41.38	2.00e-92	332.00
IUUC-Mga-059776	Meleagris gallopavo	36.65	1.00e-110	391.00
IUUC-Mvi-060208	Microbotryum violaceum	34.75	2.00e-108	385.00
IUUC-Mmr-061783	Microcebus murinus	36.38	4.00e-91	326.00
IUUC-Mdo-062856	Monodelphis domestica	36.51	7.00e-109	386.00
IUUC-Mmu-064218	Mus musculus	36.02	1.00e-107	382.00
IUUC-Mac-064886	Musa acuminata	46.23	1.00e-66	246.00
IUUC-Mpu-065735	Mustela putorius furo	36.02	1.00e-107	382.00
IUUC-Mlu-067544	Myotis lucifugus	35.96	3.00e-106	377.00
IUUC-Nfi-068502	Neosartorya fischeri	41.22	1.00e-141	494.00
IUUC-Ncr-068891	Neurospora crassa	37.03	1.00e-112	399.00
IUUC-Nle-069389	Nomascus leucogenys	36.02	9.00e-108	382.00
IUUC-Opr-070243	Ochotona princeps	42.43	5.00e-75	273.00
IUUC-Ont-071455	Oreochromis niloticus	36.89	2.00e-108	384.00
IUUC-Oan-073181	Ornithorhynchus anatinus	36.18	2.00e-106	377.00
IUUC-Ocu-073758	Oryctolagus cuniculus	36.35	3.00e-108	384.00
IUUC-Oba-075739	Oryza barthii	33.23	4.00e-89	320.00
IUUC-Obr-076111	Oryza brachyantha	34.67	1.00e-107	381.00
IUUC-Ogl-077914	Oryza glaberrima	32.65	1.00e-95	342.00
IUUC-Ogu-078057	Oryza glumaepatula	32.42	1.00e-80	291.00
IUUC-Oin-079473	Oryza indica	33.23	3.00e-98	350.00
IUUC-Olo-080645	Oryza longistaminata	29.11	2.00e-69	254.00
IUUC-Ome-081831	Oryza meridionalis	32.01	8.00e-80	289.00
IUUC-Oni-082431	Oryza nivara	33.71	1.00e-96	345.00
IUUC-Opu-083325	Oryza punctata	33.03	4.00e-90	323.00
IUUC-Oru-085131	Oryza rufipogon	32.88	7.00e-83	299.00
IUUC-Osa-086189	Oryza sativa	33.08	2.00e-97	347.00
IUUC-Ola-086574	Oryzias latipes	37.00	1.00e-109	388.00
IUUC-Oga-088827	Otolemur garnettii	36.02	1.00e-107	382.00
IUUC-Oar-089648	Ovis aries	36.02	1.00e-107	382.00
IUUC-Ptr-091195	Pan troglodytes	36.02	1.00e-107	382.00
IUUC-Pan-091978	Papio anubis	36.02	8.00e-108	382.00
IUUC-Psi-093598	Pelodiscus sinensis	36.95	2.00e-100	357.00
IUUC-Pma-094593	Petromyzon marinus	41.05	1.00e-61	228.00
IUUC-Pno-094823	Phaeosphaeria nodorum	38.46	1.00e-118	418.00
IUUC-Ppa-095455	Physcomitrella patens	33.87	1.00e-104	371.00
IUUC-Pfo-097120	Poecilia formosa	37.36	1.00e-107	381.00
IUUC-Pab-098771	Pongo abelii	36.02	9.00e-108	382.00
IUUC-Pop-099542	Populus trichocarpa	35.01	4.00e-110	390.00
IUUC-Pca-100727	Procavia capensis	38.98	1.00e-71	261.00
IUUC-Ppe-101686	Prunus persica	34.87	9.00e-111	392.00
IUUC-Pva-102414	Pteropus vampyrus	33.06	8.00e-89	319.00
IUUC-Pgr-103603	Puccinia graminis	34.17	4.00e-106	377.00
IUUC-Ptt-103995	Puccinia triticina	33.85	4.00e-90	324.00
IUUC-Pte-104359	Pyrenophora teres	38.59	4.00e-124	436.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	39.08	1.00e-123	435.00
IUUC-Rno-105064	Rattus norvegicus	36.02	1.00e-107	382.00
IUUC-Sce-106186	Saccharomyces cerevisiae	41.37	9.00e-153	531.00
IUUC-Sha-106582	Sarcophilus harrisii	36.82	8.00e-108	382.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	74.53	0.00e+00	1013.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	35.10	5.00e-117	413.00
IUUC-Smo-109097	Selaginella moellendorffii	37.79	2.00e-109	387.00
IUUC-Sit-109804	Setaria italica	34.07	9.00e-104	369.00
IUUC-Sly-111693	Solanum lycopersicum	33.92	1.00e-104	372.00
IUUC-Sar-113381	Sorex araneus	39.78	2.00e-77	281.00
IUUC-Sbi-114849	Sorghum bicolor	33.88	7.00e-103	365.00
IUUC-Sre-114945	Sporisorium reilianum	38.54	4.00e-89	320.00
IUUC-Ssc-115582	Sus scrofa	34.04	3.00e-95	340.00
IUUC-Tgu-116899	Taeniopygia guttata	36.68	7.00e-110	389.00
IUUC-Tru-118011	Takifugu rubripes	36.03	2.00e-104	371.00
IUUC-Tsy-119622	Tarsius syrichta	34.89	1.00e-45	176.00
IUUC-Tni-120598	Tetraodon nigroviridis	36.36	2.00e-104	371.00
IUUC-Tca-121247	Theobroma cacao	34.74	3.00e-111	394.00
IUUC-Tre-121949	Trichoderma reesei	34.76	5.00e-104	369.00
IUUC-Tvi-122626	Trichoderma virens	34.61	6.00e-111	392.00
IUUC-Tae-123335	Triticum aestivum	44.31	4.00e-76	277.00
IUUC-Tur-126316	Triticum urartu	30.23	3.00e-87	313.00
IUUC-Tme-126904	Tuber melanosporum	45.37	2.00e-166	577.00
IUUC-Tbe-127254	Tupaia belangeri	32.95	2.00e-89	321.00
IUUC-Ttr-128544	Tursiops truncatus	36.02	2.00e-107	381.00
IUUC-Uma-129379	Ustilago maydis	38.48	4.00e-89	321.00
IUUC-Vda-129761	Verticillium dahliae	35.06	7.00e-92	329.00
IUUC-Vpa-130485	Vicugna pacos	36.02	2.00e-107	381.00
IUUC-Vvi-131171	Vitis vinifera	33.87	1.00e-111	395.00
IUUC-Xtr-132762	Xenopus tropicalis	33.55	4.00e-86	310.00
IUUC-Xma-133583	Xiphophorus maculatus	37.36	9.00e-108	382.00
IUUC-Yli-134446	Yarrowia lipolytica	43.17	3.00e-167	580.00
IUUC-Zma-135722	Zea mays	34.21	2.00e-102	364.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence