iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109285

Ensembl Protein ID

EFJ18866

UniProt Accession

D8S9R5; D8S9R5_SELML

Genbank Protein ID

EFJ18866.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377608

Gene Name

SELMODRAFT_31884

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_31884	EFJ18866	EFJ18866

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-17	61.2	158	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+ +vtcl+f   +d+l++sG   g++ +WD
   Q: 158  HSRRVTCLEFhptNDKLVISGDKKGQVGIWD 188
           999********9766**************** PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

ERESSSSDES SDEDVDDLAA EEEEEKDEEE EIGEEEEEET KEHSAVEGKK GRKKITISLK 60
AAKLCKVCKG KDHQAGFVGS VYLDCPNRPC YLCKRPGHTT ATCPHRLASE HGVTPGIRKT 120

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Nucleotide Sequence
(Fasta)

GAGCGGGAGA GTAGCAGCAG CGATGAGAGC TCCGACGAGG ATGTAGACGA TCTTGCGGCG 60
GAGGAGGAGG AGGAGAAAGA TGAAGAAGAA GAGATTGGGG AAGAGGAGGA GGAGGAAACC 120

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Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50158--ZF_CCHC

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair

KEGG

smo:SELMODRAFT_31884

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gac-041517	Gasterosteus aculeatus	28.07	9.00e-28	117.00
IUUC-Mvi-060555	Microbotryum violaceum	24.92	7.00e-19	87.80
IUUC-Mlu-067222	Myotis lucifugus	26.99	5.00e-25	107.00
IUUC-Ppe-101966	Prunus persica	59.26	7.00e-166	576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence