iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017755

Ensembl Protein ID

Bra006677.1-P

UniProt Accession

M4CR36; M4CR36_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006677	Bra006677.1	Bra006677.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.13	4.00e-53	204.00	IUUC-Sce-106312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSDQGEKTCP LCAEEMDLTD QQLKPCKCGY QICVWCWHHI VDMAEKDQIE GRCPACRTPY 60
DKEKIVGMTV DCDSLAFETN MERKKTQKSK SKPSEGRKQL TSVRVIQRNL VYIVGLPLNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGACC AAGGAGAGAA GACTTGCCCA CTATGTGCTG AAGAGATGGA TCTCACTGAT 60
CAGCAATTGA AGCCTTGCAA ATGCGGCTAT CAGGTCTTCC CATCTTCTGT TTATTTACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0694--RNA-binding

Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1

SMART

SM00361--RRM_1

Gene Ontology

GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000464	Aegilops tauschii	60.06	7.00e-111	395.00
IUUC-Aml-002384	Ailuropoda melanoleuca	45.25	3.00e-54	206.00
IUUC-Atr-002462	Amborella trichopoda	49.72	8.00e-128	451.00
IUUC-Apl-003756	Anas platyrhynchos	45.25	2.00e-55	210.00
IUUC-Aca-004643	Anolis carolinensis	45.25	2.00e-55	210.00
IUUC-Aly-006093	Arabidopsis lyrata	60.00	1.00e-133	470.00
IUUC-Ath-007371	Arabidopsis thaliana	77.78	0.00e+00	1468.00
IUUC-Ago-007799	Ashbya gossypii	41.32	3.00e-51	196.00
IUUC-Acl-008077	Aspergillus clavatus	39.84	2.00e-44	174.00
IUUC-Afl-008720	Aspergillus flavus	34.98	1.00e-49	192.00
IUUC-Afu-008905	Aspergillus fumigatus	34.10	1.00e-44	176.00
IUUC-Ani-009264	Aspergillus nidulans	35.48	2.00e-30	127.00
IUUC-Ang-009537	Aspergillus niger	35.33	7.00e-51	196.00
IUUC-Aor-010123	Aspergillus oryzae	29.43	5.00e-32	133.00
IUUC-Ate-010409	Aspergillus terreus	34.01	2.00e-48	188.00
IUUC-Ame-011538	Astyanax mexicanus	44.34	6.00e-46	179.00
IUUC-Bgr-012062	Blumeria graminis	40.00	2.00e-51	198.00
IUUC-Bta-012419	Bos taurus	45.25	6.00e-55	208.00
IUUC-Bci-013633	Botrytis cinerea	39.09	8.00e-50	192.00
IUUC-Bdi-014913	Brachypodium distachyon	60.36	4.00e-111	395.00
IUUC-Bol-016407	Brassica oleracea	87.48	0.00e+00	1709.00
IUUC-Cel-018123	Caenorhabditis elegans	39.92	2.00e-51	197.00
IUUC-Cja-019705	Callithrix jacchus	45.25	4.00e-55	209.00
IUUC-Cfa-020440	Canis familiaris	45.25	4.00e-55	209.00
IUUC-Cpo-022091	Cavia porcellus	42.53	4.00e-52	199.00
IUUC-Csa-024202	Chlorocebus sabaeus	45.25	6.00e-55	208.00
IUUC-Cho-024410	Choloepus hoffmanni	42.54	5.00e-38	152.00
IUUC-Cin-025558	Ciona intestinalis	41.18	2.00e-52	200.00
IUUC-Cgl-026687	Colletotrichum gloeosporioides	40.32	2.00e-52	200.00
IUUC-Cne-027084	Cryptococcus neoformans	33.24	8.00e-45	175.00
IUUC-Cme-027148	Cyanidioschyzon merolae	29.67	1.00e-21	97.80
IUUC-Dre-028377	Danio rerio	44.80	2.00e-46	181.00
IUUC-Dno-029100	Dasypus novemcinctus	45.25	3.00e-55	209.00
IUUC-Dor-030310	Dipodomys ordii	44.80	3.00e-49	189.00
IUUC-Dse-031514	Dothistroma septosporum	39.42	1.00e-47	184.00
IUUC-Dme-031735	Drosophila melanogaster	42.08	5.00e-49	189.00
IUUC-Ete-033091	Echinops telfairi	42.08	3.00e-47	183.00
IUUC-Eca-033506	Equus caballus	45.25	7.00e-55	208.00
IUUC-Eeu-034506	Erinaceus europaeus	41.63	3.00e-47	183.00
IUUC-Fca-036033	Felis catus	45.25	5.00e-55	208.00
IUUC-Fal-037540	Ficedula albicollis	45.25	1.00e-55	211.00
IUUC-Fox-037944	Fusarium oxysporum	40.15	6.00e-56	212.00
IUUC-Fso-038172	Fusarium solani	39.42	4.00e-48	187.00
IUUC-Gmo-039211	Gadus morhua	43.89	4.00e-45	176.00
IUUC-Ggr-040096	Gaeumannomyces graminis	42.39	7.00e-56	213.00
IUUC-Gga-040487	Gallus gallus	45.25	1.00e-55	211.00
IUUC-Gac-042294	Gasterosteus aculeatus	41.88	8.00e-45	175.00
IUUC-Gma-043229	Glycine max	44.35	0.00e+00	690.00
IUUC-Ggo-044950	Gorilla gorilla	44.00	8.00e-39	154.00
IUUC-Hsa-046666	Homo sapiens	45.25	1.00e-54	207.00
IUUC-Hvu-047405	Hordeum vulgare	59.76	7.00e-112	398.00
IUUC-Itr-047888	Ictidomys tridecemlineatus	45.25	5.00e-52	197.00
IUUC-Kpa-049260	Komagataella pastoris	40.42	7.00e-51	194.00
IUUC-Lch-050203	Latimeria chalumnae	41.50	2.00e-55	210.00
IUUC-Lpe-051195	Leersia perrieri	63.48	5.00e-108	385.00
IUUC-Loc-052886	Lepisosteus oculatus	45.25	3.00e-47	183.00
IUUC-Lma-053073	Leptosphaeria maculans	39.32	1.00e-47	184.00
IUUC-Laf-053490	Loxodonta africana	45.25	5.00e-55	209.00
IUUC-Mcc-055724	Macaca mulatta	45.25	7.00e-55	208.00
IUUC-Meu-056787	Macropus eugenii	43.97	9.00e-23	102.00
IUUC-Mor-056921	Magnaporthe oryzae	41.56	8.00e-53	201.00
IUUC-Mpo-057616	Magnaporthe poae	42.39	3.00e-55	209.00
IUUC-Mtr-058426	Medicago truncatula	42.82	0.00e+00	708.00
IUUC-Mla-059146	Melampsora laricipopulina	38.39	6.00e-43	169.00
IUUC-Mga-059372	Meleagris gallopavo	45.25	2.00e-55	210.00
IUUC-Mvi-060479	Microbotryum violaceum	39.73	6.00e-35	143.00
IUUC-Mmr-061012	Microcebus murinus	45.25	4.00e-55	209.00
IUUC-Mdo-062330	Monodelphis domestica	45.25	2.00e-55	209.00
IUUC-Mmu-063894	Mus musculus	45.25	4.00e-55	209.00
IUUC-Mac-064805	Musa acuminata	66.39	1.00e-97	349.00
IUUC-Mpu-066894	Mustela putorius furo	45.25	4.00e-55	209.00
IUUC-Mlu-067321	Myotis lucifugus	45.25	6.00e-55	208.00
IUUC-Nfi-068451	Neosartorya fischeri	34.28	1.00e-45	179.00
IUUC-Ncr-068667	Neurospora crassa	37.41	1.00e-52	202.00
IUUC-Nle-070058	Nomascus leucogenys	44.80	2.00e-51	197.00
IUUC-Opr-071108	Ochotona princeps	33.03	4.00e-35	142.00
IUUC-Ont-071541	Oreochromis niloticus	44.34	3.00e-45	176.00
IUUC-Oan-073232	Ornithorhynchus anatinus	45.25	3.00e-55	209.00
IUUC-Ocu-074893	Oryctolagus cuniculus	45.25	6.00e-55	208.00
IUUC-Oba-075623	Oryza barthii	60.12	5.00e-57	214.00
IUUC-Obr-076653	Oryza brachyantha	58.36	1.00e-112	400.00
IUUC-Ogl-077946	Oryza glaberrima	65.55	2.00e-84	304.00
IUUC-Ogu-078775	Oryza glumaepatula	63.32	3.00e-107	380.00
IUUC-Oin-079214	Oryza indica	59.36	5.00e-114	405.00
IUUC-Olo-080799	Oryza longistaminata	50.45	2.00e-59	221.00
IUUC-Ome-081843	Oryza meridionalis	56.90	2.00e-109	389.00
IUUC-Oni-082944	Oryza nivara	60.12	3.00e-59	221.00
IUUC-Opu-083668	Oryza punctata	58.77	3.00e-113	402.00
IUUC-Oru-084249	Oryza rufipogon	43.43	5.00e-59	222.00
IUUC-Osa-086233	Oryza sativa	59.36	4.00e-114	405.00
IUUC-Ola-087121	Oryzias latipes	40.64	5.00e-46	179.00
IUUC-Olu-087772	Ostreococcus lucimarinus	41.86	9.00e-44	169.00
IUUC-Oga-088556	Otolemur garnettii	45.25	4.00e-55	209.00
IUUC-Oar-089768	Ovis aries	45.25	5.00e-55	208.00
IUUC-Ptr-090585	Pan troglodytes	45.25	7.00e-55	208.00
IUUC-Pan-092625	Papio anubis	45.25	6.00e-55	208.00
IUUC-Psi-093462	Pelodiscus sinensis	45.25	3.00e-55	209.00
IUUC-Pma-094468	Petromyzon marinus	44.54	6.00e-47	182.00
IUUC-Pno-094812	Phaeosphaeria nodorum	31.31	3.00e-23	104.00
IUUC-Pfo-096762	Poecilia formosa	40.00	7.00e-46	178.00
IUUC-Pab-097890	Pongo abelii	45.25	6.00e-55	208.00
IUUC-Pop-099764	Populus trichocarpa	45.25	0.00e+00	757.00
IUUC-Pca-101121	Procavia capensis	43.27	1.00e-33	137.00
IUUC-Ppe-102076	Prunus persica	47.88	1.00e-77	284.00
IUUC-Pva-102489	Pteropus vampyrus	45.25	3.00e-54	206.00
IUUC-Pgr-103568	Puccinia graminis	37.50	6.00e-42	166.00
IUUC-Ptt-103721	Puccinia triticina	35.53	3.00e-22	100.00
IUUC-Pte-104118	Pyrenophora teres	40.43	7.00e-51	195.00
IUUC-Pyt-104612	Pyrenophora triticirepentis	40.43	4.00e-51	196.00
IUUC-Rno-105627	Rattus norvegicus	45.25	7.00e-55	208.00
IUUC-Sce-106312	Saccharomyces cerevisiae	39.13	1.00e-50	194.00
IUUC-Sha-106619	Sarcophilus harrisii	45.25	2.00e-55	209.00
IUUC-Sja-107765	Schizosaccharomyces japonicus	40.16	2.00e-49	189.00
IUUC-Spo-108328	Schizosaccharomyces pombe	39.61	5.00e-51	194.00
IUUC-Ssl-108577	Sclerotinia sclerotiorum	38.87	3.00e-46	180.00
IUUC-Smo-108760	Selaginella moellendorffii	55.70	1.00e-80	292.00
IUUC-Sit-109923	Setaria italica	57.26	2.00e-108	387.00
IUUC-Sly-110900	Solanum lycopersicum	61.15	9.00e-111	394.00
IUUC-Stu-112226	Solanum tuberosum	62.68	1.00e-111	397.00
IUUC-Sar-113620	Sorex araneus	45.25	2.00e-53	203.00
IUUC-Sbi-114318	Sorghum bicolor	59.00	7.00e-114	405.00
IUUC-Sre-114956	Sporisorium reilianum	44.05	7.00e-55	209.00
IUUC-Ssc-116116	Sus scrofa	45.25	3.00e-52	198.00
IUUC-Tgu-117357	Taeniopygia guttata	45.25	1.00e-55	211.00
IUUC-Tru-118759	Takifugu rubripes	42.31	6.00e-45	175.00
IUUC-Tsy-119387	Tarsius syrichta	45.25	4.00e-54	206.00
IUUC-Tni-120536	Tetraodon nigroviridis	42.53	4.00e-44	172.00
IUUC-Tca-121035	Theobroma cacao	65.14	6.00e-145	508.00
IUUC-Tre-121996	Trichoderma reesei	39.83	2.00e-48	188.00
IUUC-Tvi-122371	Trichoderma virens	39.38	8.00e-54	206.00
IUUC-Tae-124373	Triticum aestivum	59.76	2.00e-111	396.00
IUUC-Tur-126324	Triticum urartu	59.76	1.00e-111	397.00
IUUC-Tme-127072	Tuber melanosporum	33.60	9.00e-37	149.00
IUUC-Tbe-128107	Tupaia belangeri	43.44	2.00e-49	190.00
IUUC-Ttr-128846	Tursiops truncatus	45.25	5.00e-54	205.00
IUUC-Uma-129607	Ustilago maydis	44.05	7.00e-55	209.00
IUUC-Vda-129971	Verticillium dahliae	38.99	2.00e-43	171.00
IUUC-Vpa-130298	Vicugna pacos	40.27	2.00e-43	170.00
IUUC-Vvi-131651	Vitis vinifera	47.06	0.00e+00	800.00
IUUC-Xtr-132728	Xenopus tropicalis	41.50	5.00e-55	208.00
IUUC-Xma-133789	Xiphophorus maculatus	40.00	9.00e-46	178.00
IUUC-Yli-134461	Yarrowia lipolytica	39.38	7.00e-45	174.00
IUUC-Zma-135031	Zea mays	60.29	1.00e-112	400.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence