iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014896

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100837922; BRADI_1g75750

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G75750	BRADI1G75750.1	BRADI1G75750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-14	54.1	1	68
E3 adaptor/Cullin RING/DCX/DWD	4.90e-25	87.1	261	291
UBD/Beta-Prp	1.60e-47	162.7	216	430

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++C+Is+e++++Pvv++ sG  ++r+ Ie+++++ gk cPvt+ +l+ +dlv  +t + +  + +++ s
   Q: 1    MICAISGEVPEEPVVSKnSGLLFERRLIERYIEDHGK-CPVTKDELAMDDLVAVKTNKITKPRPLQAAS 68
           58**********************************9.*********************9999888765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ ++t+l+f +   ll++Gs D+t+++W 
   Q: 261  GHSKKITSLKFvPWdELLITGSADKTVRIWQ 291
           8***********555***************6 PP

UBD/Beta-Prp

   S: 48   l.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletg...qcleetlsghdg 138
           l + +++++ +++++++++i++tg+ D ++ ++d  +g+ + tl+gh+++++sl+f p ++ l++Gs+d+t+r+w+ +++    c + tl+ h++
   Q: 216  LhKTNKPGILSIDIHHSKDIIATGGIDTNAVLFDRPSGQVLCTLTGHSKKITSLKFVPWDELLITGSADKTVRIWQGSEDgnyGCRH-TLKDHNA 309
           546788999999999999999999999999999999999999999999999999999999999999999999998665541105555.9999999 PP
   S: 139  vvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
            v+ v+vh +++++v++s D+t  ++d++tg++l++  +   +d  +  +f+++g  l +g     vk+wd++t++ v ++ gh   v+ + fs+
   Q: 310  EVQAVTVHATQKYFVTASRDNTWCFYDISTGSCLTQVgEASGQDGYTAAAFHPDGLILGTGTSEAVVKIWDVKTQSNVAKFDGHVGAVTAMSFSE 404
           99999999999999999999999999999999999995333455556666999999999999999999999999999999999999999999999 PP
   S: 233  nderlvsgssDgsiriWdlrsgdllkt 259
           n+ +l++++ Dg +++Wdlr+  + +t
   Q: 405  NGYFLATAAVDG-VKLWDLRKLRNFRT 430
           999999988776.79999998776665 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MICAISGEVP EEPVVSKNSG LLFERRLIER YIEDHGKCPV TKDELAMDDL VAVKTNKITK 60
PRPLQAASVP GLLGMFQNEW DALMLSNFAL EQQLHTSRQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTTGTG CCAGTAAGCA TCTGCCTCTT CTCCCCATTA CCGAGACCTA GCTCTCCGCC 60
CGCTCTCTCC TTCCGCAAGC ACTAATTGAC TCGCCTTCTC TTGCTGCGGG ATCCGCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

bdi:100837922

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	86.68	0.00e+00	915.00
IUUC-Ath-007693	Arabidopsis thaliana	71.70	0.00e+00	784.00
IUUC-Bol-016207	Brassica oleracea	71.62	0.00e+00	778.00
IUUC-Bra-017902	Brassica rapa	70.88	0.00e+00	775.00
IUUC-Cel-018271	Caenorhabditis elegans	39.58	3.00e-103	367.00
IUUC-Cne-026860	Cryptococcus neoformans	38.29	3.00e-96	345.00
IUUC-Cme-027168	Cyanidioschyzon merolae	28.57	5.00e-19	89.00
IUUC-Ggr-039854	Gaeumannomyces graminis	33.52	2.00e-60	226.00
IUUC-Mvi-060441	Microbotryum violaceum	34.40	6.00e-72	264.00
IUUC-Mac-064972	Musa acuminata	79.81	0.00e+00	888.00
IUUC-Ptt-103984	Puccinia triticina	36.10	2.00e-79	289.00
IUUC-Sce-106147	Saccharomyces cerevisiae	38.46	8.00e-24	104.00
IUUC-Smo-109648	Selaginella moellendorffii	65.89	0.00e+00	730.00
IUUC-Sre-115134	Sporisorium reilianum	35.07	5.00e-82	297.00
IUUC-Tca-121807	Theobroma cacao	74.19	0.00e+00	814.00
IUUC-Tae-125174	Triticum aestivum	90.87	0.00e+00	988.00
IUUC-Tur-126199	Triticum urartu	81.30	0.00e+00	946.00
IUUC-Uma-129626	Ustilago maydis	36.16	7.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence